Replication of progressive supranuclear palsy genome-wide association study identifies SLCO1A2 and DUSP10 as new susceptibility loci

Abstract Background Progressive supranuclear palsy (PSP) is a parkinsonian neurodegenerative tauopathy affecting brain regions involved in motor function, including the basal ganglia, diencephalon and brainstem. While PSP is largely considered to be a sporadic disorder, cases with suspected familial...

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Main Authors: Monica Y. Sanchez-Contreras, Naomi Kouri, Casey N. Cook, Daniel J. Serie, Michael G. Heckman, NiCole A. Finch, Richard J. Caselli, Ryan J. Uitti, Zbigniew K. Wszolek, Neill Graff-Radford, Leonard Petrucelli, Li-San Wang, Gerard D. Schellenberg, Dennis W. Dickson, Rosa Rademakers, Owen A. Ross
Format: Article
Language:English
Published: BMC 2018-07-01
Series:Molecular Neurodegeneration
Online Access:http://link.springer.com/article/10.1186/s13024-018-0267-3
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spelling doaj-e855fad797a54c078bf1a17639f6a8fc2020-11-24T21:30:54ZengBMCMolecular Neurodegeneration1750-13262018-07-0113111010.1186/s13024-018-0267-3Replication of progressive supranuclear palsy genome-wide association study identifies SLCO1A2 and DUSP10 as new susceptibility lociMonica Y. Sanchez-Contreras0Naomi Kouri1Casey N. Cook2Daniel J. Serie3Michael G. Heckman4NiCole A. Finch5Richard J. Caselli6Ryan J. Uitti7Zbigniew K. Wszolek8Neill Graff-Radford9Leonard Petrucelli10Li-San Wang11Gerard D. Schellenberg12Dennis W. Dickson13Rosa Rademakers14Owen A. Ross15Department of Neuroscience, Mayo ClinicDepartment of Neuroscience, Mayo ClinicDepartment of Neuroscience, Mayo ClinicDepartment of Health Sciences Research, Mayo ClinicDepartment of Health Sciences Research, Mayo ClinicDepartment of Neuroscience, Mayo ClinicDepartment of Neurology, Mayo ClinicDepartment of Neurology, Mayo ClinicDepartment of Neurology, Mayo ClinicDepartment of Neurology, Mayo ClinicDepartment of Neuroscience, Mayo ClinicPenn Neurodegeneration Genomics Center, Department of Pathology and Laboratory Medicine, Perelman School of Medicine, University of PennsylvaniaPenn Neurodegeneration Genomics Center, Department of Pathology and Laboratory Medicine, Perelman School of Medicine, University of PennsylvaniaDepartment of Neuroscience, Mayo ClinicDepartment of Neuroscience, Mayo ClinicDepartment of Neuroscience, Mayo ClinicAbstract Background Progressive supranuclear palsy (PSP) is a parkinsonian neurodegenerative tauopathy affecting brain regions involved in motor function, including the basal ganglia, diencephalon and brainstem. While PSP is largely considered to be a sporadic disorder, cases with suspected familial inheritance have been identified and the common MAPT H1haplotype is a major genetic risk factor. Due to the relatively low prevalence of PSP, large sample sizes can be difficult to achieve, and this has limited the ability to detect true genetic risk factors at the genome-wide statistical threshold for significance in GWAS data. With this in mind, in this study we genotyped the genetic variants that displayed the strongest degree of association with PSP (P<1E-4) in the previous GWAS in a new cohort of 533 pathologically-confirmed PSP cases and 1172 controls, and performed a combined analysis with the previous GWAS data. Results Our findings validate the known association of loci at MAPT, MOBP, EIF2AK3 and STX6 with risk of PSP, and uncover novel associations with SLCO1A2 (rs11568563) and DUSP10 (rs6687758) variants, both of which were classified as non-significant in the original GWAS. Conclusions Resolving the genetic architecture of PSP will provide mechanistic insights and nominate candidate genes and pathways for future therapeutic intervention strategies.http://link.springer.com/article/10.1186/s13024-018-0267-3
collection DOAJ
language English
format Article
sources DOAJ
author Monica Y. Sanchez-Contreras
Naomi Kouri
Casey N. Cook
Daniel J. Serie
Michael G. Heckman
NiCole A. Finch
Richard J. Caselli
Ryan J. Uitti
Zbigniew K. Wszolek
Neill Graff-Radford
Leonard Petrucelli
Li-San Wang
Gerard D. Schellenberg
Dennis W. Dickson
Rosa Rademakers
Owen A. Ross
spellingShingle Monica Y. Sanchez-Contreras
Naomi Kouri
Casey N. Cook
Daniel J. Serie
Michael G. Heckman
NiCole A. Finch
Richard J. Caselli
Ryan J. Uitti
Zbigniew K. Wszolek
Neill Graff-Radford
Leonard Petrucelli
Li-San Wang
Gerard D. Schellenberg
Dennis W. Dickson
Rosa Rademakers
Owen A. Ross
Replication of progressive supranuclear palsy genome-wide association study identifies SLCO1A2 and DUSP10 as new susceptibility loci
Molecular Neurodegeneration
author_facet Monica Y. Sanchez-Contreras
Naomi Kouri
Casey N. Cook
Daniel J. Serie
Michael G. Heckman
NiCole A. Finch
Richard J. Caselli
Ryan J. Uitti
Zbigniew K. Wszolek
Neill Graff-Radford
Leonard Petrucelli
Li-San Wang
Gerard D. Schellenberg
Dennis W. Dickson
Rosa Rademakers
Owen A. Ross
author_sort Monica Y. Sanchez-Contreras
title Replication of progressive supranuclear palsy genome-wide association study identifies SLCO1A2 and DUSP10 as new susceptibility loci
title_short Replication of progressive supranuclear palsy genome-wide association study identifies SLCO1A2 and DUSP10 as new susceptibility loci
title_full Replication of progressive supranuclear palsy genome-wide association study identifies SLCO1A2 and DUSP10 as new susceptibility loci
title_fullStr Replication of progressive supranuclear palsy genome-wide association study identifies SLCO1A2 and DUSP10 as new susceptibility loci
title_full_unstemmed Replication of progressive supranuclear palsy genome-wide association study identifies SLCO1A2 and DUSP10 as new susceptibility loci
title_sort replication of progressive supranuclear palsy genome-wide association study identifies slco1a2 and dusp10 as new susceptibility loci
publisher BMC
series Molecular Neurodegeneration
issn 1750-1326
publishDate 2018-07-01
description Abstract Background Progressive supranuclear palsy (PSP) is a parkinsonian neurodegenerative tauopathy affecting brain regions involved in motor function, including the basal ganglia, diencephalon and brainstem. While PSP is largely considered to be a sporadic disorder, cases with suspected familial inheritance have been identified and the common MAPT H1haplotype is a major genetic risk factor. Due to the relatively low prevalence of PSP, large sample sizes can be difficult to achieve, and this has limited the ability to detect true genetic risk factors at the genome-wide statistical threshold for significance in GWAS data. With this in mind, in this study we genotyped the genetic variants that displayed the strongest degree of association with PSP (P<1E-4) in the previous GWAS in a new cohort of 533 pathologically-confirmed PSP cases and 1172 controls, and performed a combined analysis with the previous GWAS data. Results Our findings validate the known association of loci at MAPT, MOBP, EIF2AK3 and STX6 with risk of PSP, and uncover novel associations with SLCO1A2 (rs11568563) and DUSP10 (rs6687758) variants, both of which were classified as non-significant in the original GWAS. Conclusions Resolving the genetic architecture of PSP will provide mechanistic insights and nominate candidate genes and pathways for future therapeutic intervention strategies.
url http://link.springer.com/article/10.1186/s13024-018-0267-3
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