Optimal neighborhood indexing for protein similarity search

<p>Abstract</p> <p>Background</p> <p>Similarity inference, one of the main bioinformatics tasks, has to face an exponential growth of the biological data. A classical approach used to cope with this data flow involves heuristics with large seed indexes. In order to spee...

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Bibliographic Details
Main Authors: Nguyen Van, Lavenier Dominique, Noé Laurent, Peterlongo Pierre, Kucherov Gregory, Giraud Mathieu
Format: Article
Language:English
Published: BMC 2008-12-01
Series:BMC Bioinformatics
Online Access:http://www.biomedcentral.com/1471-2105/9/534