LeafGo: Leaf to Genome, a quick workflow to produce high-quality de novo plant genomes using long-read sequencing technology

LeafGo: Leaf to Genome, a quick workflow to produce high-quality de novo plant genomes using long-read sequencing technology

Abstract Currently, different sequencing platforms are used to generate plant genomes and no workflow has been properly developed to optimize time, cost, and assembly quality. We present LeafGo, a complete de novo plant genome workflow, that starts from tissue and produces genomes with modest labora...

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Bibliographic Details
Main Authors: Patrick Driguez, Salim Bougouffa, Karen Carty, Alexander Putra, Kamel Jabbari, Muppala Reddy, Richard Soppe, Ming Sin Cheung, Yoshinori Fukasawa, Luca Ermini
Format: Article
Language:English
Published: BMC 2021-09-01
Series:Genome Biology
Subjects:
Long-read sequencing
Chromosome-level draft genome
High molecular weight DNA extraction
Eucalyptus
Peanut
Arachis
Online Access:https://doi.org/10.1186/s13059-021-02475-z

Internet

https://doi.org/10.1186/s13059-021-02475-z

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