Modeling of DNA binding to the condensin hinge domain using molecular dynamics simulations guided by atomic force microscopy.

The condensin protein complex compacts chromatin during mitosis using its DNA-loop extrusion activity. Previous studies proposed scrunching and loop-capture models as molecular mechanisms for the loop extrusion process, both of which assume the binding of double-strand (ds) DNA to the hinge domain f...

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Bibliographic Details
Main Authors: Hiroki Koide, Noriyuki Kodera, Shveta Bisht, Shoji Takada, Tsuyoshi Terakawa
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2021-07-01
Series:PLoS Computational Biology
Online Access:https://doi.org/10.1371/journal.pcbi.1009265