Rust expression browser: an open source database for simultaneous analysis of host and pathogen gene expression profiles with expVIP

Rust expression browser: an open source database for simultaneous analysis of host and pathogen gene expression profiles with expVIP

Abstract Background Transcriptomics is being increasingly applied to generate new insight into the interactions between plants and their pathogens. For the wheat yellow (stripe) rust pathogen (Puccinia striiformis f. sp. tritici, Pst) RNA-based sequencing (RNA-Seq) has proved particularly valuable,...

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Bibliographic Details
Main Authors: Thomas M. Adams, Tjelvar S. G. Olsson, Ricardo H. Ramírez-González, Ruth Bryant, Rosie Bryson, Pablo Eduardo Campos, Paul Fenwick, David Feuerhelm, Charlotte Hayes, Tina Henriksson, Amelia Hubbard, Radivoje Jevtić, Christopher Judge, Matthew Kerton, Jacob Lage, Clare M. Lewis, Christine Lilly, Udi Meidan, Dario Novoselović, Colin Patrick, Ruth Wanyera, Diane G. O. Saunders
Format: Article
Language:English
Published: BMC 2021-03-01
Series:BMC Genomics
Subjects:
RNA-Seq
expVIP
Gene expression browser
Wheat yellow rust
Puccinia striiformis f. sp. tritici
Transcriptomics
Online Access:https://doi.org/10.1186/s12864-021-07488-3

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https://doi.org/10.1186/s12864-021-07488-3

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