A Review on Sequence Alignment Algorithms for Short Reads Based on Next-Generation Sequencing

A Review on Sequence Alignment Algorithms for Short Reads Based on Next-Generation Sequencing

With recent advances in next-generation sequencing (NGS) technology, large volumes of data have been produced in the form of short reads. Sequence assembly involves using initial short reads to produce progressively longer contigs, and then using scaffolds to produce the final sequence. These proces...

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Bibliographic Details
Main Authors: Jeongkyu Kim, Mingeun Ji, Gangman Yi
Format: Article
Language:English
Published: IEEE 2020-01-01
Series:IEEE Access
Subjects:
NGS
sequence alignment
read alignment
FM-index
hashing
Online Access:https://ieeexplore.ieee.org/document/9223667/

Internet

https://ieeexplore.ieee.org/document/9223667/

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