IntEREst: intron-exon retention estimator

IntEREst: intron-exon retention estimator

Abstract Background In-depth study of the intron retention levels of transcripts provide insights on the mechanisms regulating pre-mRNA splicing efficiency. Additionally, detailed analysis of retained introns can link these introns to post-transcriptional regulation or identify aberrant splicing eve...

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Bibliographic Details
Main Authors: Ali Oghabian, Dario Greco, Mikko J. Frilander
Format: Article
Language:English
Published: BMC 2018-04-01
Series:BMC Bioinformatics
Subjects:
RNA-seq
Intron retention
Alternative splicing
RNA
Expression analysis
Bioconductor
Online Access:http://link.springer.com/article/10.1186/s12859-018-2122-5

Internet

http://link.springer.com/article/10.1186/s12859-018-2122-5

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