Heuristic and Hierarchical-Based Population Mining of Salmonella enterica Lineage I Pan-Genomes as a Platform to Enhance Food Safety

Heuristic and Hierarchical-Based Population Mining of Salmonella enterica Lineage I Pan-Genomes as a Platform to Enhance Food Safety

The recent incorporation of bacterial whole-genome sequencing (WGS) into Public Health laboratories has enhanced foodborne outbreak detection and source attribution. As a result, large volumes of publicly available datasets can be used to study the biology of foodborne pathogen populations at an unp...

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Bibliographic Details
Main Authors: Joao Carlos Gomes-Neto, Natasha Pavlovikj, Carmen Cano, Baha Abdalhamid, Gabriel Asad Al-Ghalith, John Dustin Loy, Dan Knights, Peter C. Iwen, Byron D. Chaves, Andrew K. Benson
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-10-01
Series:Frontiers in Sustainable Food Systems
Subjects:
Salmonella enterica
whole-genome sequencing
population genomics
foodborne pathogens
pan-genome
food safety
Online Access:https://www.frontiersin.org/articles/10.3389/fsufs.2021.725791/full

Internet

https://www.frontiersin.org/articles/10.3389/fsufs.2021.725791/full

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