Assessing computational methods for transcription factor target gene identification based on ChIP-seq data.

Chromatin immunoprecipitation coupled with deep sequencing (ChIP-seq) has great potential for elucidating transcriptional networks, by measuring genome-wide binding of transcription factors (TFs) at high resolution. Despite the precision of these experiments, identification of genes directly regulat...

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Bibliographic Details
Main Authors: Weronika Sikora-Wohlfeld, Marit Ackermann, Eleni G Christodoulou, Kalaimathy Singaravelu, Andreas Beyer
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2013-01-01
Series:PLoS Computational Biology
Online Access:http://europepmc.org/articles/PMC3837635?pdf=render