Combining RNA-seq data and homology-based gene prediction for plants, animals and fungi

Combining RNA-seq data and homology-based gene prediction for plants, animals and fungi

Abstract Background Genome annotation is of key importance in many research questions. The identification of protein-coding genes is often based on transcriptome sequencing data, ab-initio or homology-based prediction. Recently, it was demonstrated that intron position conservation improves homology...

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Bibliographic Details
Main Authors: Jens Keilwagen, Frank Hartung, Michael Paulini, Sven O. Twardziok, Jan Grau
Format: Article
Language:English
Published: BMC 2018-05-01
Series:BMC Bioinformatics
Subjects:
Homology-based gene prediction
RNA-seq
Genome annotation
Online Access:http://link.springer.com/article/10.1186/s12859-018-2203-5

Internet

http://link.springer.com/article/10.1186/s12859-018-2203-5

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