A practical comparison of methods for detecting transcription factor binding sites in ChIP-seq experiments

<p>Abstract</p> <p>Background</p> <p>Chromatin immunoprecipitation coupled with massively parallel sequencing (ChIP-seq) is increasingly being applied to study transcriptional regulation on a genome-wide scale. While numerous algorithms have recently been proposed for a...

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Bibliographic Details
Main Authors: Lahesmaa Riitta, Tuomela Soile, Raghav Sunil, Laajala Teemu D, Aittokallio Tero, Elo Laura L
Format: Article
Language:English
Published: BMC 2009-12-01
Series:BMC Genomics
Online Access:http://www.biomedcentral.com/1471-2164/10/618