A script to highlight hydrophobicity and charge on protein surfaces

A script to highlight hydrophobicity and charge on protein surfaces

The composition of protein surfaces determines both affinity and specificity of protein-protein interactions. Matching of hydrophobic contacts and charged groups on both sites of the interface are crucial to ensure specificity. Here, we propose a highlighting scheme, YRB, which highlights both hydro...

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Bibliographic Details
Main Authors: Dominique eHagemans, Ianthe A.E.M. van Belzen, Tania eMorán Luengo, Stefan G. D. Rüdiger
Format: Article
Language:English
Published: Frontiers Media S.A. 2015-10-01
Series:Frontiers in Molecular Biosciences
Subjects:
protein-protein interaction
surface hydrophobicity
PyMol
Amino acid properties
Charge pairs
Online Access:http://journal.frontiersin.org/Journal/10.3389/fmolb.2015.00056/full

Internet

http://journal.frontiersin.org/Journal/10.3389/fmolb.2015.00056/full

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