PHF6 regulates phenotypic plasticity through chromatin organization within lineage-specific genes

Developmental and lineage plasticity have been observed in numerous malignancies and have been correlated with tumor progression and drug resistance. However, little is known about the molecular mechanisms that enable such plasticity to occur. Here, we describe the function of the plant homeodomain...

Full description

Bibliographic Details
Main Authors: Weintraub, Abraham S. (Author), Buenrostro, Jason D. (Author), Cheng, Christine S. (Author), Regev, Aviv (Author), Young, Richard A. (Author), Soto Feliciano, Yadira M. (Contributor), Bartlebaugh, Jordan M. E. (Contributor), Sanchez-Rivera, Francisco Javier (Contributor), Bhutkar, Arjun (Contributor), Jacks, Tyler E. (Contributor), Hemann, Michael (Contributor), Liu, Yunpeng,S.M.Massachusetts Institute of Technology (Author)
Other Authors: Massachusetts Institute of Technology. Department of Biology (Contributor), Koch Institute for Integrative Cancer Research at MIT (Contributor), Liu, Yunpeng (Contributor)
Format: Article
Language:English
Published: Cold Spring Harbor Laboratory Press, 2018-03-19T19:51:00Z.
Subjects:
Online Access:Get fulltext
LEADER 03036 am a22003733u 4500
001 114229
042 |a dc 
100 1 0 |a Weintraub, Abraham S.  |e author 
100 1 0 |a Massachusetts Institute of Technology. Department of Biology  |e contributor 
100 1 0 |a Koch Institute for Integrative Cancer Research at MIT  |e contributor 
100 1 0 |a Soto Feliciano, Yadira M.  |e contributor 
100 1 0 |a Bartlebaugh, Jordan M. E.  |e contributor 
100 1 0 |a Liu, Yunpeng  |e contributor 
100 1 0 |a Sanchez-Rivera, Francisco Javier  |e contributor 
100 1 0 |a Bhutkar, Arjun  |e contributor 
100 1 0 |a Jacks, Tyler E.  |e contributor 
100 1 0 |a Hemann, Michael  |e contributor 
700 1 0 |a Buenrostro, Jason D.  |e author 
700 1 0 |a Cheng, Christine S.  |e author 
700 1 0 |a Regev, Aviv  |e author 
700 1 0 |a Young, Richard A.  |e author 
700 1 0 |a Soto Feliciano, Yadira M.  |e author 
700 1 0 |a Bartlebaugh, Jordan M. E.  |e author 
700 1 0 |a Sanchez-Rivera, Francisco Javier  |e author 
700 1 0 |a Bhutkar, Arjun  |e author 
700 1 0 |a Jacks, Tyler E.  |e author 
700 1 0 |a Hemann, Michael  |e author 
700 1 0 |a Liu, Yunpeng,S.M.Massachusetts Institute of Technology.  |e author 
245 0 0 |a PHF6 regulates phenotypic plasticity through chromatin organization within lineage-specific genes 
260 |b Cold Spring Harbor Laboratory Press,   |c 2018-03-19T19:51:00Z. 
856 |z Get fulltext  |u http://hdl.handle.net/1721.1/114229 
520 |a Developmental and lineage plasticity have been observed in numerous malignancies and have been correlated with tumor progression and drug resistance. However, little is known about the molecular mechanisms that enable such plasticity to occur. Here, we describe the function of the plant homeodomain finger protein 6 (PHF6) in leukemia and define its role in regulating chromatin accessibility to lineage-specific transcription factors. We show that loss of Phf6 in B-cell leukemia results in systematic changes in gene expression via alteration of the chromatin landscape at the transcriptional start sites of B-cell-and T-cell-specific factors. Additionally, Phf6 KO cells showsignificant downregulation of genes involved in the development and function of normal B cells, show up-regulation of genes involved in T-cell signaling, and give rise to mixed-lineage lymphoma in vivo. Engagement of divergent transcriptional programs results in phenotypic plasticity that leads to altered disease presentation in vivo, tolerance of aberrant oncogenic signaling, and differential sensitivity to frontline and targeted therapies. These findings suggest that active maintenance of a precise chromatin landscape is essential for sustaining proper leukemia cell identity and that loss of a single factor (PHF6) can cause focal changes in chromatin accessibility and nucleosome positioning that render cells susceptible to lineage transition. Keywords: PHF6; phenotypic plasticity; chromatin regulation; leukemia; lineage maintenance; nucleosome positioning 
655 7 |a Article 
773 |t Genes & Development