Efficient stochastic simulation of reaction-diffusion processes via direct compilation

Efficient stochastic simulation of reaction-diffusion processes via direct compilation

We present the Stochastic Simulator Compiler (SSC), a tool for exact stochastic simulations of well-mixed and spatially heterogeneous systems. SSC is the first tool to allow a readable high-level description with spatially heterogeneous simulation algorithms and complex geometries; this permits larg...

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Bibliographic Details
Main Authors: Lis, Mieszko (Contributor), Artyomov, Maxim N. (Contributor), Chakraborty, Arup K. (Contributor), Devadas, Srinivas (Contributor)
Other Authors: Massachusetts Institute of Technology. Computer Science and Artificial Intelligence Laboratory (Contributor), Massachusetts Institute of Technology. Department of Biological Engineering (Contributor), Massachusetts Institute of Technology. Department of Chemical Engineering (Contributor), Massachusetts Institute of Technology. Department of Chemistry (Contributor)
Format: Article
Language:English
Published: Oxford University Press, 2010-11-04T18:32:37Z.
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