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70988 |
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|a Bulyk, Martha L.
|e author
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|a Harvard University-
|e contributor
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|a Bulyk, Martha L.
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|a Bulyk, Martha L.
|e contributor
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|a Robasky, Kimberly
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|a UniPROBE, update 2011: expanded content and search tools in the online database of protein-binding microarray data on protein-DNA interactions
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|b Oxford University Press (OUP),
|c 2012-06-01T17:56:13Z.
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|z Get fulltext
|u http://hdl.handle.net/1721.1/70988
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|a The Universal PBM Resource for Oligonucleotide-Binding Evaluation (UniPROBE) database is a centralized repository of information on the DNA-binding preferences of proteins as determined by universal protein-binding microarray (PBM) technology. Each entry for a protein (or protein complex) in UniPROBE provides the quantitative preferences for all possible nucleotide sequence variants ('words') of length k ('k-mers'), as well as position weight matrix (PWM) and graphical sequence logo representations of the k-mer data. In this update, we describe >130% expansion of the database content, incorporation of a protein BLAST (blastp) tool for finding protein sequence matches in UniPROBE, the introduction of UniPROBE accession numbers and additional database enhancements. The UniPROBE database is available at http://uniprobe.org.
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|a National Institutes of Health (U.S.) (grant number R01 HG003985)
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|a en_US
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|a Article
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|t Nucleic Acids Research
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