Universal Count Correction for High-Throughput Sequencing

We show that existing RNA-seq, DNase-seq, and ChIP-seq data exhibit overdispersed per-base read count distributions that are not matched to existing computational method assumptions. To compensate for this overdispersion we introduce a nonparametric and universal method for processing per-base seque...

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Bibliographic Details
Main Authors: Hashimoto, Tatsunori Benjamin (Contributor), Edwards, Matthew Douglas (Contributor), Gifford, David K. (Contributor)
Other Authors: Massachusetts Institute of Technology. Computer Science and Artificial Intelligence Laboratory (Contributor)
Format: Article
Language:English
Published: Public Library of Science, 2014-05-02T14:50:09Z.
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