De novo ChIP-seq analysis

Methods for the analysis of chromatin immunoprecipitation sequencing (ChIP-seq) data start by aligning the short reads to a reference genome. While often successful, they are not appropriate for cases where a reference genome is not available. Here we develop methods for de novo analysis of ChIP-seq...

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Bibliographic Details
Main Authors: He, Xin (Author), Cicek, A. Ercument (Author), Wang, Yuhao (Contributor), Schulz, Marcel H. (Author), Le, Hai-Son (Author), Bar-Joseph, Ziv (Author)
Other Authors: Massachusetts Institute of Technology. Computer Science and Artificial Intelligence Laboratory (Contributor), Massachusetts Institute of Technology. Department of Electrical Engineering and Computer Science (Contributor)
Format: Article
Language:English
Published: BioMed Central, 2015-09-24T17:52:22Z.
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