Inverted Sequence Identification in Diploid Genomic Scaffold Assembly via Weighted MAX-CUT Reduction

Virtually all genome assemblers to date are designed for use with data from haploid or homozygous diploid genomes. Their use on heterozygous genomic datasets generally results in highly-fragmented, error-prone assemblies, owing to the violation of assumptions during both the contigging and scaffoldi...

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Bibliographic Details
Main Author: Bodily, Paul Mark
Format: Others
Published: BYU ScholarsArchive 2013
Subjects:
Online Access:https://scholarsarchive.byu.edu/etd/3793
https://scholarsarchive.byu.edu/cgi/viewcontent.cgi?article=4792&context=etd