BASOPHILE: ACCURATE FRAGMENT CHARGE STATE PREDICTION IMPROVES PEPTIDE IDENTIFICATION RATES

In shotgun proteomics, database search algorithms rely on fragmentation models to predict fragment ions that should be observed for a given peptide sequence. The most widely used strategy (Naïve model) is oversimplified, breaking all peptide bonds with equal probability to produce fragments of all c...

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Bibliographic Details
Main Author: Wang, Dong
Other Authors: Bing Zhang
Format: Others
Language:en
Published: VANDERBILT 2012
Subjects:
Online Access:http://etd.library.vanderbilt.edu/available/etd-10302012-183017/