Core column prediction for protein multiple sequence alignments

Core column prediction for protein multiple sequence alignments

Background: In a computed protein multiple sequence alignment, the coreness of a column is the fraction of its substitutions that are in so-called core columns of the gold-standard reference alignment of its proteins. In benchmark suites of protein reference alignments, the core columns of the refer...

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Bibliographic Details
Main Authors: DeBlasio, Dan, Kececioglu, John
Other Authors: Univ Arizona, Dept Comp Sci
Language:en
Published: BIOMED CENTRAL LTD 2017
Subjects:
Multiple sequence alignment
Core blocks
Alignment accuracy
Accuracy estimation
Parameter advising
Machine learning
Regression
Online Access:http://hdl.handle.net/10150/623957
http://arizona.openrepository.com/arizona/handle/10150/623957

Internet

http://hdl.handle.net/10150/623957
http://arizona.openrepository.com/arizona/handle/10150/623957

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