A Multi-Dimensional Width-Bounded Geometric Separator and its Applications to Protein Folding

We used a divide-and-conquer algorithm to recursively solve the two-dimensional problem of protein folding of an HP sequence with the maximum number of H-H contacts. We derived both lower and upper bounds for the algorithmic complexity by using the newly introduced concept of multi-directional w...

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Bibliographic Details
Main Author: Oprisan, Sorinel
Format: Others
Published: ScholarWorks@UNO 2005
Subjects:
Online Access:http://scholarworks.uno.edu/td/238
http://scholarworks.uno.edu/cgi/viewcontent.cgi?article=1242&context=td