Detecting high-scoring local alignments in pangenome graphs
Motivation: Increasing amounts of individual genomes sequenced per species motivate the usage of pangenomic approaches. Pangenomes may be represented as graphical structures, e.g. compacted colored de Bruijn graphs, which offer a low memory usage and facilitate reference-free sequence comparisons. W...
Main Authors: | , , , , |
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Format: | Article |
Language: | English |
Published: |
Oxford University Press
2021
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Subjects: | |
Online Access: | View Fulltext in Publisher |