Detecting high-scoring local alignments in pangenome graphs

Motivation: Increasing amounts of individual genomes sequenced per species motivate the usage of pangenomic approaches. Pangenomes may be represented as graphical structures, e.g. compacted colored de Bruijn graphs, which offer a low memory usage and facilitate reference-free sequence comparisons. W...

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Bibliographic Details
Main Authors: Hach, F. (Author), Rahmann, S. (Author), Schulz, T. (Author), Stoye, J. (Author), Wittler, R. (Author)
Format: Article
Language:English
Published: Oxford University Press 2021
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