CellWalkR: An R package for integrating and visualizing single-cell and bulk data to resolve regulatory elements

CellWalkR is an R package that integrates single-cell open chromatin data with cell type labels and bulk epigenetic data to identify cell type-specific regulatory regions. A Graphics Processing Unit (GPU) implementation and downsampling strategies enable thousands of cells to be processed in seconds...

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Bibliographic Details
Main Authors: Pollard, K.S (Author), Przytycki, P.F (Author)
Format: Article
Language:English
Published: Oxford University Press 2022
Subjects:
Online Access:View Fulltext in Publisher