PEPATAC: An optimized pipeline for ATAC-seq data analysis with serial alignments

As chromatin accessibility data from ATAC-seq experiments continues to expand, there is continuing need for standardized analysis pipelines. Here, we present PEPATAC, an ATAC-seq pipeline that is easily applied to ATAC-seq projects of any size, from one-off experiments to large-scale sequencing proj...

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Bibliographic Details
Main Authors: Chang, H.Y (Author), Corces, M.R (Author), Reuter, V.P (Author), Sheffield, N.C (Author), Smith, J.P (Author), Xu, J. (Author)
Format: Article
Language:English
Published: Oxford University Press 2021
Online Access:View Fulltext in Publisher