Species-level resolution of female bladder microbiota from 16s rrna amplicon sequencing

Species-level resolution of female bladder microbiota from 16s rrna amplicon sequencing

The human bladder contains bacteria, even in the absence of infection. Interest in studying these bacteria and their association with bladder conditions is increasing. However, the chosen experimental method can limit the resolution of the taxonomy that can be assigned to the bacteria found in the b...

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Bibliographic Details
Main Authors: Fields, I. (Author), Gregory, W.T (Author), Hoffman, C. (Author), Karstens, L. (Author), Mooney, M.A (Author), Siddiqui, N.Y (Author), Simon, H.M (Author), Wolfe, A.J (Author)
Format: Article
Language:English
Published: American Society for Microbiology 2021
Subjects:
16S sequencing
Algorithms
amplicon
Article
bacterium isolate
Bioinformatics
bladder
Bladder
classification algorithm
Corynebacterium
DNA sequence
Enterobacter cloacae
female
human
Microbiome
microflora
nonhuman
reference database
RNA 16S
RNA sequencing
species identification
Taxonomic classification
urine sampling
Urobiome
whole genome sequencing
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