MicrobeAnnotator: a user-friendly, comprehensive functional annotation pipeline for microbial genomes

MicrobeAnnotator: a user-friendly, comprehensive functional annotation pipeline for microbial genomes

Background: High-throughput sequencing has increased the number of available microbial genomes recovered from isolates, single cells, and metagenomes. Accordingly, fast and comprehensive functional gene annotation pipelines are needed to analyze and compare these genomes. Although several approaches...

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Bibliographic Details
Main Authors: Conrad, R.E (Author), Konstantinidis, K.T (Author), Ruiz-Perez, C.A (Author)
Format: Article
Language:English
Published: BioMed Central Ltd 2021
Subjects:
Comparative genomics
Computationally efficient
Enzyme commissions
Escherichia coli
Functional annotation
Genes
genetics
Genome annotation
Genome, Microbial
genomics
Genomics
High-throughput analysis
High-throughput sequencing
Metabolic potential
Metabolic reconstruction
Metabolism
microbial genome
Microbial genomes
molecular genetics
Molecular Sequence Annotation
Personal computers
Pipelines
procedures
Protein annotation
Proteins
software
Software
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