Grouping of genomic markers in populations with family structure

Grouping of genomic markers in populations with family structure

Background: Linkage and linkage disequilibrium (LD) between genome regions cause dependencies among genomic markers. Due to family stratification in populations with non-random mating in livestock or crop, the standard measures of population LD such as r2 may be biased. Grouping of markers according...

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Bibliographic Details
Main Authors: Doschoris, M. (Author), Klosa, J. (Author), Wittenburg, D. (Author)
Format: Article
Language:English
Published: BioMed Central Ltd 2021
Subjects:
Agriculture
allele
article
calculation
chromosome
Chromosome segments
Clustering
covariance
Covariance matrix
Dimension reduction
dimensionality reduction
Family structure
gene linkage disequilibrium
Genes
genetic linkage
Genetic Linkage
genetic marker
genome
Genome
genomics
Genomics
greedy algorithm
Greedy algorithms
Group lasso
human
Humans
Linkage disequilibrium
Linkage Disequilibrium
Polymorphism, Single Nucleotide
Population structures
sensitivity and specificity
Sensitivity and specificity
simulation
Simulation studies
single nucleotide polymorphism
Single nucleotide polymorphism
SNP-BLUP
TagSNP
theoretical study
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