RiboA: a web application to identify ribosome A-site locations in ribosome profiling data

RiboA: a web application to identify ribosome A-site locations in ribosome profiling data

Background: Translation is a fundamental process in gene expression. Ribosome profiling is a method that enables the study of transcriptome-wide translation. A fundamental, technical challenge in analyzing Ribo-Seq data is identifying the A-site location on ribosome-protected mRNA fragments. Identif...

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Bibliographic Details
Main Authors: Ahmed, N. (Author), O’Brien, E.P (Author), Shao, D. (Author), Soni, N. (Author)
Format: Article
Language:English
Published: BioMed Central Ltd 2021
Subjects:
Accurate analysis
Biological facts
Coding sequences
Codon, Terminator
Density profile
Gene expression
genetics
HTTP
Integer programming
Location
Macromolecules
messenger RNA
metabolism
Molecular factors
open reading frame
Open Reading Frames
Program translators
Protein Biosynthesis
protein synthesis
ribosome
Ribosome profiling
Ribosomes
RNA, Messenger
Scientific exploration
Signal to noise ratio
stop codon
Technical challenges
Web application
WEB application
Web services
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