Segmentor: a tool for manual refinement of 3D microscopy annotations

Segmentor: a tool for manual refinement of 3D microscopy annotations

Background: Recent advances in tissue clearing techniques, combined with high-speed image acquisition through light sheet microscopy, enable rapid three-dimensional (3D) imaging of biological specimens, such as whole mouse brains, in a matter of hours. Quantitative analysis of such 3D images can hel...

Full description

Bibliographic Details
Main Authors: Beltran, A.A (Author), Borland, D. (Author), Escobar-Tomlienovich, C.F (Author), Farah, T.M (Author), Kim, M. (Author), Krupa, O. (Author), McCormick, C.M (Author), Mory, J.T (Author), Olson, S.S (Author), Patel, N.K (Author), Stein, J.L (Author), Wu, G. (Author)
Format: Article
Language:English
Published: BioMed Central Ltd 2021
Subjects:
algorithm
Algorithms
animal
Animals
article
Automated segmentation
Biological specimens
brain
Brain
deep learning
Deep learning
HTTP
human
human experiment
image processing
Image Processing, Computer-Assisted
Image segmentation
Imaging, Three-Dimensional
Learning algorithms
Light sheet microscopy
Light-sheet microscopies
Mammals
Manual annotation
Mice
microscopy
Microscopy
mouse
Open source tools
Region-splitting
segmentation algorithm
Segmentation algorithms
Three dimensional (3-D) imaging
three-dimensional imaging
Tissue clearing
Online Access:View Fulltext in Publisher

Internet

View Fulltext in Publisher

Similar Items