RPocket: an intuitive database of RNA pocket topology information with RNA-ligand data resources

RPocket: an intuitive database of RNA pocket topology information with RNA-ligand data resources

Background: RNA regulates a variety of biological functions by interacting with other molecules. The ligand often binds in the RNA pocket to trigger structural changes or functions. Thus, it is essential to explore and visualize the RNA pocket to elucidate the structural and recognition mechanism fo...

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Bibliographic Details
Main Authors: Wang, H. (Author), Zeng, C. (Author), Zhao, Y. (Author), Zhou, T. (Author)
Format: Article
Language:English
Published: BioMed Central Ltd 2021
Subjects:
binding site
Binding Sites
Bioinformatics tools
Biological functions
biology
Complexation
Computational Biology
Database systems
Drug discovery
genetics
Geometrical informations
Geometrical property
Geometry
ligand
Ligands
Medical applications
Pocket database
protein secondary structure
Protein Structure, Secondary
Recognition mechanism
RNA
RNA-ligand interaction
Secondary structure elements
Structure prediction
Tertiary interactions
Topology
Topology information
Van der Waals forces
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