RNAlign2D: a rapid method for combined RNA structure and sequence-based alignment using a pseudo-amino acid substitution matrix

RNAlign2D: a rapid method for combined RNA structure and sequence-based alignment using a pseudo-amino acid substitution matrix

Background: The functions of RNA molecules are mainly determined by their secondary structures. These functions can also be predicted using bioinformatic tools that enable the alignment of multiple RNAs to determine functional domains and/or classify RNA molecules into RNA families. However, the exi...

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Bibliographic Details
Main Authors: Jaruzelska, J. (Author), Sajek, M. (Author), Sajek, M.P (Author), Woźniak, T. (Author)
Format: Article
Language:English
Published: BioMed Central Ltd 2021
Subjects:
2D structures
algorithm
Algorithms
amino acid sequence
amino acid substitution
Amino acid substitution
Amino Acid Substitution
Amino acids
article
conformation
genetics
human
Humans
muscle
Nucleic Acid Conformation
protein secondary structure
Proteins
RNA
RNA 2d structure
RNA 2D structure
RNA alignment
RNA molecules
RNA secondary structure alignment
RNA secondary structures
RNA sequence
RNA sequences
sequence alignment
Sequence Alignment
sequence analysis
Sequence Analysis, RNA
software
Software
Structure alignment
transcription initiation
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