HaplotypeTools: a toolkit for accurately identifying recombination and recombinant genotypes

HaplotypeTools: a toolkit for accurately identifying recombination and recombinant genotypes

Background: Identifying haplotypes is central to sequence analysis in diploid or polyploid genomes. Despite this, there remains a lack of research and tools designed for physical phasing and its downstream analysis. Results: HaplotypeTools is a new toolset to phase variant sites using VCF and BAM fi...

Full description

Bibliographic Details
Main Author: Farrer, R.A (Author)
Format: Article
Language:English
Published: BioMed Central Ltd 2021
Subjects:
algorithm
Algorithms
article
Batrachochytria dendrobatidi
Batrachochytrium dendrobatidis
diploidy
DNA sequence
Down-stream
Genes
genetic association
genetic recombination
genomics
Genomics
haplotype
Haplotype
Haplotypes
heterozygosity
high throughput sequencing
High-Throughput Nucleotide Sequencing
human
Hybridisation
Hybridization
licence
nonhuman
Open source software
Phasing
Phylogenetic
phylogeny
Phylogeny
Polymorphism, Single Nucleotide
polyploidy
Recombination
Recombination, Genetic
Sequence analysis
Sequence Analysis, DNA
sexual deviation
simulation
single nucleotide polymorphism
software
Software
synthesis dependent strand annealing
Toolsets
Online Access:View Fulltext in Publisher

Internet

View Fulltext in Publisher

Similar Items