DeepGRP: engineering a software tool for predicting genomic repetitive elements using Recurrent Neural Networks with attention

Background: Repetitive elements contribute a large part of eukaryotic genomes. For example, about 40 to 50% of human, mouse and rat genomes are repetitive. So identifying and classifying repeats is an important step in genome annotation. This annotation step is traditionally performed using alignmen...

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Bibliographic Details
Main Authors: Hausmann, F. (Author), Kurtz, S. (Author)
Format: Article
Language:English
Published: BioMed Central Ltd 2021
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Online Access:View Fulltext in Publisher