TT-Mars: structural variants assessment based on haplotype-resolved assemblies

Variant benchmarking is often performed by comparing a test callset to a gold standard set of variants. In repetitive regions of the genome, it may be difficult to establish what is the truth for a call, for example, when different alignment scoring metrics provide equally supported but different va...

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Bibliographic Details
Main Authors: Chaisson, M.J.P (Author), Yang, J. (Author)
Format: Article
Language:English
Published: BioMed Central Ltd 2022
Subjects:
Online Access:View Fulltext in Publisher