RESCRIPt: Reproducible sequence taxonomy reference database management

RESCRIPt: Reproducible sequence taxonomy reference database management

Nucleotide sequence and taxonomy reference databases are critical resources for widespread applications including marker-gene and metagenome sequencing for microbiome analysis, diet metabarcoding, and environmental DNA (eDNA) surveys. Reproducibly generating, managing, using, and evaluating nucleoti...

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Bibliographic Details
Main Authors: Bokulich, N.A (Author), Dillon, M.R (Author), Foster, J.T (Author), Kaehler, B.D (Author), O'Rourke, D.R (Author), Robeson, M.S., II (Author), Ziemski, M. (Author)
Format: Article
Language:English
Published: Public Library of Science 2021
Subjects:
animal
Animals
Article
biology
classification
Classification
cluster analysis
comparative study
Computational Biology
controlled study
database management system
Database Management Systems
Databases, Genetic
Databases, Nucleic Acid
DNA barcoding
DNA Barcoding, Taxonomic
filtration
GenBank
genetic database
genetics
genome analysis
genomics
Genomics
hepatitis
human
Humans
metagenome
Metagenome
metagenomics
Metagenomics
microbiome
Microbiota
microflora
nucleic acid database
nucleotide sequence
online system
phylogeny
Phylogeny
qualitative analysis
quantitative analysis
reference database
reproducibility
RNA 16S
RNA, Ribosomal, 16S
sequence analysis
Sequence Analysis
software
Software
standardization
taxonomy
workflow
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Internet

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