Genome-based characterization of Escherichia coli causing bloodstream infection through next-generation sequencing

Genome-based characterization of Escherichia coli causing bloodstream infection through next-generation sequencing

Escherichia coli are one of the commonest bacteria causing bloodstream infection (BSI). The aim of the research was to identify the serotypes, MLST (Multi Locus Sequence Type), virulence genes, and antimicrobial resistance of E. coli isolated from bloodstream infection hospitalized patients in Cipto...

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Bibliographic Details
Main Authors: Erlina, L. (Author), Fadilah, F. (Author), Nelwan, E.J (Author), Paramita, R.I (Author), Puspandari, N. (Author), Renesteen, E. (Author)
Format: Article
Language:English
Published: Public Library of Science 2021
Subjects:
aminoglycoside antibiotic agent
antibiotic resistance
Article
bacteremia
Bacteremia
bacterial gene
bacterial genome
bacterial virulence
bacterium isolate
beta lactam antibiotic
bloodstream infection
cell adhesion
chloramphenicol
classification
clinical article
DNA isolation
Drug Resistance, Multiple, Bacterial
enteroaggregative Escherichia coli
Escherichia coli
Escherichia coli infection
Escherichia coli Infections
extraintestinal pathogenic Escherichia coli
Extraintestinal Pathogenic Escherichia coli
gene isolation
gene sequence
genetic code
genetics
Genome, Bacterial
high throughput sequencing
High-Throughput Nucleotide Sequencing
hospital patient
host cell
human
Humans
immune evasion
Immune Evasion
Indonesia
isolation and purification
macrolide
microbiology
multidrug resistance
multilocus sequence typing
Multilocus Sequence Typing
nonhuman
nuclear magnetic resonance
pathogenicity
phylogeny
Phylogeny
procedures
quinoline derived antiinfective agent
serotype
trimethoprim
virulence factor
Virulence Factors
virulence gene
whole genome sequencing
Whole Genome Sequencing
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