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1“...Abstract Although Kraken’s k-mer-based approach provides a fast taxonomic classification...”
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2“...Hundreds of years ago, sailors were terrified by the Kraken, a dreadful sea monster capable...”
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3by John A. Cigliano, John A. Cigliano, Amy Bauer, Megan M. Draheim, Melissa Foley, Carolyn J. Lundquist, Carolyn J. Lundquist, Julie-Beth McCarthy, Katheryn W. Patterson, Andrew J. Wright, E.C.M. Parsons“... to address. Here we describe and discuss these Kraken in the aquarium questions—the marine equivalent...”
Published 2016-09-01
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4“... 2 also proved to be the most computationally expensive. Kraken, first released in 2014, has been...”
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5“.... We present KrakenUniq, a novel metagenomics classifier that combines the fast k-mer-based...”
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7by Valtavirta Ville, Lauranto Unna, Hovi Ville, Peltonen Jussi, Rintala Antti, Tuominen Riku, Leppänen JaakkoSubjects: “...kraken...”
Published 2021-01-01
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10by Dominik Hadzega, Gabriel Minarik, Marian Karaba, Katarina Kalavska, Juraj Benca, Sona Ciernikova, Tatiana Sedlackova, Petra Nemcova, Martin Bohac, Daniel Pindak, Lubos Klucar, Michal MegoSubjects: “...Kraken2...”
Published 2021-08-01
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11by Kazuo Imai, Kazuo Imai, Rina Nemoto, Masahiro Kodana, Norihito Tarumoto, Norihito Tarumoto, Jun Sakai, Jun Sakai, Toru Kawamura, Kenji Ikebuchi, Kotaro Mitsutake, Takashi Murakami, Takashi Murakami, Shigefumi Maesaki, Shigefumi Maesaki, Taku Fujiwara, Satoshi Hayakawa, Tomonori Hoshino, Mitsuko Seki, Mitsuko Seki, Takuya Maeda, Takuya MaedaSubjects: “...Kraken...”
Published 2020-01-01
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13by Felix M. Kibegwa, Rawlynce C. Bett, Charles K. Gachuiri, Francesca Stomeo, Fidalis D. Mujibi“... compared two commonly used pipelines for shotgun metagenomic analysis: MG-RAST and Kraken 2, in terms...”
Published 2020-01-01
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14by Yeonhwa Jo, Chang-Gi Back, Kook-Hyung Kim, Hyosub Chu, Jeong Hun Lee, Sang Hyun Moh, Won Kyong Cho“..., KRAKEN2 with raw data reads (KRAKEN2_R) might be superior for the identification of microbial species...”
Published 2021-06-01
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15“... retained to comprise the HumGut collection. Using the Kraken2 software for classification, we find superior...”
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16by Kodjovi D. Mlaga, Alban Mathieu, Alban Mathieu, Charles Joly Beauparlant, Charles Joly Beauparlant, Alban Ott, Ahmad Khodr, Olivier Perin, Arnaud Droit, Arnaud Droit“... novel approach, Hierarchical Clustering with Kraken (HCK), to classify ITS1 amplicons and Abundance-Base...”
Published 2021-05-01
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18“... the finite element model with the popular normal mode model KRAKEN by calculating sound fields in Pekeris...”
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19“... with KrakEN) uses the taxonomic assignments made by Kraken, a very fast read-level classifier, along...”
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20by Thomas Nordahl Petersen, Oksana Lukjancenko, Martin Christen Frølund Thomsen, Maria Maddalena Sperotto, Ole Lund, Frank Møller Aarestrup, Thomas Sicheritz-Pontén“... annotations. A comparison between MGmapper and Kraken at species level, shows MGmapper assigns taxonomy...”
Published 2017-01-01
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