Improved metagenomic analysis with Kraken 2

by Derrick E. Wood, Jennifer Lu, Ben Langmead
Published 2019-11-01

The Kraken: when myth encounters science

by Rodrigo B. Salvador, Barbara M. Tomotani
Published 2014-09-01

The Kraken in the Aquarium: questions that urgently need to be addressed in order to advance marine conservation

by John A. Cigliano, John A. Cigliano, Amy Bauer, Megan M. Draheim, Melissa Foley, Carolyn J. Lundquist, Carolyn J. Lundquist, Julie-Beth McCarthy, Katheryn W. Patterson, Andrew J. Wright, E.C.M. Parsons
Published 2016-09-01

Ultrafast and accurate 16S rRNA microbial community analysis using Kraken 2

by Jennifer Lu, Steven L. Salzberg
Published 2020-08-01

KrakenUniq: confident and fast metagenomics classification using unique k-mer counts

by F. P. Breitwieser, D. N. Baker, S. L. Salzberg
Published 2018-11-01

Enhancing the Resolution of Rumen Microbial Classification from Metatranscriptomic Data Using Kraken and Mothur

by Andre L. A. Neves, Fuyong Li, Bibaswan Ghoshal, Tim McAllister, Le L. Guan
Published 2017-12-01

HIGH FIDELITY AND REDUCED ORDER SOLUTIONS TO AN SMR-LEVEL PROGRESSION PROBLEM WITH THE KRAKEN COMPUTATIONAL FRAMEWORK

by Valtavirta Ville, Lauranto Unna, Hovi Ville, Peltonen Jussi, Rintala Antti, Tuominen Riku, Leppänen Jaakko
Published 2021-01-01

Release of the Kraken: A Novel Money Multiplier Equation’s Debut in 21st Century Banking

by Brian P. Hanley
Published 2012-01-01

Release of the Kraken: A Novel Money Multiplier Equation’s Debut in 21st Century Banking

by Brian P. Hanley
Published 2011-04-01

Uncovering Microbial Composition in Human Breast Cancer Primary Tumour Tissue Using Transcriptomic RNA-seq

by Dominik Hadzega, Gabriel Minarik, Marian Karaba, Katarina Kalavska, Juraj Benca, Sona Ciernikova, Tatiana Sedlackova, Petra Nemcova, Martin Bohac, Daniel Pindak, Lubos Klucar, Michal Mego
Published 2021-08-01

Rapid and Accurate Species Identification of Mitis Group Streptococci Using the MinION Nanopore Sequencer

by Kazuo Imai, Kazuo Imai, Rina Nemoto, Masahiro Kodana, Norihito Tarumoto, Norihito Tarumoto, Jun Sakai, Jun Sakai, Toru Kawamura, Kenji Ikebuchi, Kotaro Mitsutake, Takashi Murakami, Takashi Murakami, Shigefumi Maesaki, Shigefumi Maesaki, Taku Fujiwara, Satoshi Hayakawa, Tomonori Hoshino, Mitsuko Seki, Mitsuko Seki, Takuya Maeda, Takuya Maeda
Published 2020-01-01

Pathogen Species Identification from Metagenomes in Ancient Remains: The Challenge of Identifying Human Pathogenic Species of Trypanosomatidae via Bioinformatic Tools

by Denis Sereno, Franck Dorkeld, Mohammad Akhoundi, Pascale Perrin
Published 2018-08-01

A Comparison of Two DNA Metagenomic Bioinformatic Pipelines While Evaluating the Microbial Diversity in Feces of Tanzanian Small Holder Dairy Cattle

by Felix M. Kibegwa, Rawlynce C. Bett, Charles K. Gachuiri, Francesca Stomeo, Fidalis D. Mujibi
Published 2020-01-01

Comparative Study of Metagenomics and Metatranscriptomics to Reveal Microbiomes in Overwintering Pepper Fruits

by Yeonhwa Jo, Chang-Gi Back, Kook-Hyung Kim, Hyosub Chu, Jeong Hun Lee, Sang Hyun Moh, Won Kyong Cho
Published 2021-06-01

HumGut: a comprehensive human gut prokaryotic genomes collection filtered by metagenome data

by Pranvera Hiseni, Knut Rudi, Robert C. Wilson, Finn Terje Hegge, Lars Snipen
Published 2021-07-01

HCK and ABAA: A Newly Designed Pipeline to Improve Fungi Metabarcoding Analysis

by Kodjovi D. Mlaga, Alban Mathieu, Alban Mathieu, Charles Joly Beauparlant, Charles Joly Beauparlant, Alban Ott, Ahmad Khodr, Olivier Perin, Arnaud Droit, Arnaud Droit
Published 2021-05-01

Object Detection in Sonar Images

by Divas Karimanzira, Helge Renkewitz, David Shea, Jan Albiez
Published 2020-07-01

A Finite Element Model for Underwater Sound Propagation in 2-D Environment

by Yi-Qing Zhou, Wen-Yu Luo
Published 2021-09-01

Bracken: estimating species abundance in metagenomics data

by Jennifer Lu, Florian P. Breitwieser, Peter Thielen, Steven L. Salzberg
Published 2017-01-01

MGmapper: Reference based mapping and taxonomy annotation of metagenomics sequence reads.

by Thomas Nordahl Petersen, Oksana Lukjancenko, Martin Christen Frølund Thomsen, Maria Maddalena Sperotto, Ole Lund, Frank Møller Aarestrup, Thomas Sicheritz-Pontén
Published 2017-01-01