O8 Cell-associated HIV-1 unspliced RNA level predicts both time to virological suppression...

by Alexander Pasternak, Jan Prins, Ben Berkhout
Published 2016-09-01

What do we measure when we measure cell-associated HIV RNA

by Alexander O. Pasternak, Ben Berkhout
Published 2018-01-01

Dendritic cells potently purge latent HIV-1 beyond TCR-stimulation, activating the PI3K-Akt-mTOR pathwayResearch in context

by Thijs van Montfort, Renée van der Sluis, Gilles Darcis, Doyle Beaty, Kevin Groen, Alexander O. Pasternak, Georgios Pollakis, Monique Vink, Ellen M. Westerhout, Mohamed Hamdi, Margreet Bakker, Boas van der Putten, Suzanne Jurriaans, Jan H. Prins, Rienk Jeeninga, Adri A.M. Thomas, Dave Speijer, Ben Berkhout
Published 2019-04-01

CD32+CD4+ T Cells Are Highly Enriched for HIV DNA and Can Support Transcriptional Latency

by Gilles Darcis, Neeltje A. Kootstra, Berend Hooibrink, Thijs van Montfort, Irma Maurer, Kevin Groen, Suzanne Jurriaans, Margreet Bakker, Carine van Lint, Ben Berkhout, Alexander O. Pasternak
Published 2020-02-01

The Impact of HIV-1 Genetic Diversity on CRISPR-Cas9 Antiviral Activity and Viral Escape

by Gilles Darcis, Caroline S. Binda, Bep Klaver, Elena Herrera-Carrillo, Ben Berkhout, Atze T. Das
Published 2019-03-01

HIV-1 tolerates changes in A-count in a small segment of the pol gene

by Bep Klaver, Yme van der Velden, Formijn van Hemert, Antoinette C. van der Kuyl, Ben Berkhout
Published 2017-09-01

CRISPR-Cas9 Dual-gRNA Attack Causes Mutation, Excision and Inversion of the HIV-1 Proviral DNA

by Caroline S. Binda, Bep Klaver, Ben Berkhout, Atze T. Das
Published 2020-03-01

Influence of a 3′ Terminal Ribozyme on AgoshRNA Biogenesis and Activity

by Elena Herrera-Carrillo, Zongliang Gao, Ben Berkhout
Published 2019-06-01

HIV-1 Escape From RNAi Antivirals: Yet Another Houdini Action?

by Ben Berkhout, Atze T Das
Published 2012-01-01

Delineation of the Exact Transcription Termination Signal for Type 3 Polymerase III

by Zongliang Gao, Elena Herrera-Carrillo, Ben Berkhout
Published 2018-03-01

RNA Polymerase II Activity of Type 3 Pol III Promoters

by Zongliang Gao, Elena Herrera-Carrillo, Ben Berkhout
Published 2018-09-01

Euclidean Distance Analysis Enables Nucleotide Skew Analysis in Viral Genomes

by Formijn van Hemert, Maarten Jebbink, Andries van der Ark, Frits Scholer, Ben Berkhout
Published 2018-01-01

On the generation of the MSD-Ѱ class of defective HIV proviruses

by Atze T. Das, Alexander O. Pasternak, Ben Berkhout
Published 2019-07-01

Tackling HIV Persistence: Pharmacological versus CRISPR-Based Shock Strategies

by Gilles Darcis, Atze T. Das, Ben Berkhout
Published 2018-03-01

A Phylogenetic Survey on the Structure of the HIV-1 Leader RNA Domain That Encodes the Splice Donor Signal

by Nancy Mueller, Atze T. Das, Ben Berkhout
Published 2016-07-01

The Quest for Cellular Markers of HIV Reservoirs: Any Color You Like

by Gilles Darcis, Gilles Darcis, Ben Berkhout, Alexander O. Pasternak
Published 2019-09-01

The Splice of Life: Does RNA Processing Have a Role in HIV-1 Persistence?

by Alexander O. Pasternak, Ben Berkhout
Published 2021-09-01

Preclinical In Vivo Evaluation of the Safety of a Multi-shRNA-based Gene Therapy Against HIV-1

by Mireille Centlivre, Nicolas Legrand, Sofieke Klamer, Ying Poi Liu, Karin Jasmijn von Eije, Martino Bohne, Esther Siteur-van Rijnstra, Kees Weijer, Bianca Blom, Carlijn Voermans, Hergen Spits, Ben Berkhout
Published 2013-01-01

Differences in HIV Markers between Infected Individuals Treated with Different ART Regimens: Implications for the Persistence of Viral Reservoirs

by Gilles Darcis, Ben Berkhout, Alexander O. Pasternak
Published 2020-04-01

Deep Sequence Analysis of AgoshRNA Processing Reveals 3’ A Addition and Trimming

by Alex Harwig, Elena Herrera-Carrillo, Aldo Jongejan, Antonius Hubertus van Kampen, Ben Berkhout
Published 2015-01-01