Single cell biology—a Keystone Symposia report

by Alon, U., Arbel-Goren, R., Arekatla, G., Balzer, M.S, Cable, J., Cai, L., Domingos, A.I, Elowitz, M.B, Fan, J., Gaiti, F., Galloway, K.E, Garcia, H.G, Greenwald, N.F, Guilliams, M., Habib, N., Hamel, R., Hamidzada, H., Hong, C.K.Y, Itzkovitz, S., Junker, J.P, Keren, L., Klein, A.M, Liberali, P., Morris, S.A, Murray, J.I, Pfau, S.J, Quake, S.R, Raj, A., Ratz, M., Romeike, M., Rulands, S., Santos, S.D.M, Shalek, A.K, Spencer, S.L, Stergachis, A.B, Streets, A., Trapnell, C., Vento-Tormo, R., Wang, B., Whited, J., Yanai, I., Zhang, N.R
Published 2021

Shared genetic and epigenetic mechanisms between chronic periodontitis and oral squamous cell carcinoma

by Acharya, A., Deng, Y., Haak, R., Hu, X., Li, H., Li, S., Liu, X., Pan, H., Savkovic, V., Schmalz, G., Schmidt, J., Shang, R., Shang, W., Wu, N., Xu, C., Yu, Y., Zhou, Y., Ziebolz, D.
Published 2018

Programming cell growth into different cluster shapes using diffusible signals

by Brenner, M.P, Guo, Y., Nitzan, M.
Published 2021

DeepCellState: An autoencoder-based framework for predicting cell type specific transcriptional states induced by drug treatment

by Arner, E., Li, Y., Umarov, R.
Published 2021

Transcriptomic profiling in canines and humans reveals cancer specific gene modules and biological mechanisms common to both species

by Braisted, J., Breen, M., Gerhold, D., Grewal, G., LeBlanc, A.K, Mazcko, C., Sittampalam, G., Tawa, G.J
Published 2021

A data-driven approach for constructing mutation categories for mutational signature analysis

by Gilad, G., Leiserson, M.D.M, Sharan, R.
Published 2021

Regulation of transcription reactivation dynamics exiting mitosis

by Molina, N., Riba, A., Sarnataro, S.
Published 2021

Integrative analysis of hub genes and key pathway in two subtypes of diffuse large B-cell lymphoma by bioinformatics and basic experiments

by Charwudzi, A., Hu, L., Li, Q., Meng, Y., Zhai, Z., Zhu, W.
Published 2021

Redundancy-selection trade-off in phenotype-structured populations

by Azaele, S., Evans, R.M.L, Miele, L.
Published 2021

A spatio-temporal model to reveal oscillator phenotypes in molecular clocks: Parameter estimation elucidates circadian gene transcription dynamics in single-cells

by Brancaccio, M., Finkenstädt, B., Hastings, M., Johansen, A.M, Unosson, M.
Published 2021

Cell-to-cell and type-to-type heterogeneity of signaling networks: insights from the crowd

by Bodenmiller, B., Cao, W., Chung, V., Driessen, A., Gabor, A., Guo, B., Saez-Rodriguez, J., Shen, H., Single Cell Signaling in Breast Cancer DREAM Consortium members, Tanevski, J., Tognetti, M., Yu, T.
Published 2021

A OneStep Solution to Fix and Stain Cells for Correlative Live and Fixed Microscopy

by Fermino do Rosário, C., Fritz-Laylin, L.K, Velle, K.B, Wadsworth, P.
Published 2021

Analysis of 11,430 recombinant protein production experiments reveals that protein yield is tunable by synonymous codon changes of translation initiation sites

by Bhandari, B.K, Chen, A., Gardner, P.P, Lim, C.S, Remus, D.M, van Dolleweerd, C.
Published 2021

A novel CD209 polymorphism is associated with rheumatoid arthritis patients in Taiwan

by Chan, H.-C, Li, R.-N, Lin, C.-H, Lin, Y.-Z, Wang, S.-C, Yen, J.-H
Published 2021

A hybrid stochastic-deterministic approach to explore multiple infection and evolution in HIV

by Komarova, N.L, Kreger, J., Wodarz, D.
Published 2021

Biomedical Data Commons (BMDC) prioritizes B-lymphocyte non-coding genetic variants in Type 1 Diabetes

by Bhardwaj, P., Gaddam, S., Guha, R.V, Oro, A.E, Piekos, S.N, Radhakrishnan, P.
Published 2021

Vitamin D level, lipid profile, and vitamin D receptor and transporter gene variants in sickle cell disease patients from Kurdistan of Iraq

by Abdulkarim, O.A, Hama, A.H, Karimi, M., Mozafari, H., Rahimi, Z., Shakiba, E.
Published 2021

Multiscale model of defective interfering particle replication for influenza A virus infection in animal cell culture

by Hein, M.D, Kupke, S.Y, Pelz, L., Reichl, U., Rüdiger, D.
Published 2021

Identification of potential biomarkers associated with immune infiltration in papillary renal cell carcinoma

by Cao, J., Deng, R., Li, J., Man, J., Yang, L., Zhao, H., Zou, Z.
Published 2021

ReFeaFi: Genome-wide prediction of regulatory elements driving transcription initiation

by Arakawa, T., Arner, E., Gao, X., Li, Y., Takizawa, S., Umarov, R.
Published 2021