Diverse cell stresses induce unique patterns of tRNA up- and down-regulation: tRNA-seq for quantifying changes in tRNA copy number

by Pang, Yan Ling Joy, Abo, Ryan, Levine, Stuart S., Dedon, Peter C
Published 2014

Global analysis of cell cycle gene expression of the legume symbiont Sinorhizobium meliloti

by Penterman, Jon, Walker, Graham C., De Nisco, Nicole J., Abo, Ryan, Wu, C. Max
Published 2014

Host plant peptides elicit a transcriptional response to control the Sinorhizobium meliloti cell cycle during symbiosis

by Penterman, Jon, Abo, Ryan, De Nisco, Nicole J., Arnold, Markus F. F., Walker, Graham C., Longhi, Renato, Zanda, Matteo
Published 2014

Integrative Gene Set Analysis: Application to Platinum Pharmacogenomics

by Fridley, Brooke L., Tan, Xiang-Lin, Jenkins, Gregory D., Batzler, Anthony, Moyer, Ann M., Biernacka, Joanna M., Wang, Liewei, Abo, Ryan
Published 2017

Arsenic Exposure Perturbs the Gut Microbiome and Its Metabolic Profile in Mice: An Integrated Metagenomics and Metabolomics Analysis

by Lu, Kun, Schlieper, Katherine Ann, Graffam, Michelle E., Wishnok, John S., Swenberg, James A., Levine, Stuart S., Abo, Ryan, Fox, James G, Tannenbaum, Steven R
Published 2015

Multiplexed DNA repair assays for multiple lesions and multiple doses via transcription inhibition and transcriptional mutagenesis

by Nagel, Zachary D., Margulies, Carrie Marie, Chaim, Isaac Alexander, McRee, Siobhan K., Mazzucato, Patrizia, Ahmad, Anwaar, Abo, Ryan, Butty, Vincent, Forget, Anthony L., Samson, Leona D.
Published 2014

Genetic association with overall survival of taxane-treated lung cancer patients - a genome-wide association study in human lymphoblastoid cell lines followed by a clinical associa...

by Niu, Nifang, Schaid, Daniel J., Abo, Ryan, Kalari, Krishna, Fridley, Brooke L., Feng, Qiping, Jenkins, Gregory, Batzler, Anthony, Brisbin, Abra G., Cunningham, Julie M., Li, Liang, Sun, Zhifu, Yang, Ping, Wang, Liewei
Published 2013

Gut Microbiome Perturbations Induced by Bacterial Infection Affect Arsenic Biotransformation

by Lu, Kun, Cable, Peter Hans, Ru, Hongyu, Graffam, Michelle E., Schlieper, Katherine Ann, Bodnar, Wanda M., Wishnok, John S., Styblo, Miroslav, Swenberg, James A., Levine, Stuart S., Abo, Ryan, Fox, James G, Parry, Nicola Maria Anne, Tannenbaum, Steven R
Published 2015

Braveheart, a Long Noncoding RNA Required for Cardiovascular Lineage Commitment

by Klattenhoff, Carla A, Scheuermann, Johanna C, Surface, Lauren E, Bradley, Robert K, Fields, Paul A, Steinhauser, Matthew L, Ding, Huiming, Torrey, Lillian, Haas, Simon, Abo, Ryan, Tabebordbar, Mohammadsharif, Lee, Richard T, Burge, Christopher B, Klattenhoff, Carla A., Scheuermann, Johanna C., Bradley, Robert K., Fields, Paul A., Butty, Vincent L G, Boyer, Laurie Ann, Surface, Lauren Elizabeth, Burge, Christopher B
Published 2016