Enhanced killing of antibiotic-resistant bacteria enabled by massively parallel combinatorial genetics

by Cheng, Allen A., Ding, Huiming, Lu, Timothy K.
Published 2015

ProPortal: a resource for integrated systems biology of Prochlorococcus and its phage

by Kelly, Libusha, Huang, Katherine H., Ding, Huiming, Chisholm, Sallie (Penny)
Published 2012

Genetic diversity in cultured and wild marine cyanomyoviruses reveals phosphorus stress as a strong selective agent

by Kelly, Libusha, Ding, Huiming, Huang, Katherine H., Chisholm, Sallie (Penny), Osburne, Marcia Susan
Published 2015

The extracellular matrix: Tools and insights for the "omics" era

by Clauser, Karl R., Carr, Steven A., Naba, Alexandra, Ding, Huiming, Whittaker, Charles A., Hynes, Richard O.
Published 2017

Characterization of the Extracellular Matrix of Normal and Diseased Tissues Using Proteomics

by Pearce, Oliver M. T., Del Rosario, Amanda, Ma, Duanduan, Ding, Huiming, Rajeeve, Vinothini, Cutillas, Pedro R., Balkwill, Frances R., Naba, Alexandra, Hynes, Richard O
Published 2018

Genomes of diverse isolates of the marine cyanobacterium Prochlorococcus

by Berube, Paul M., Kelly, Libusha, Awad, Lana, Roache-Johnson, Kathryn H., Ding, Huiming, Giovannoni, Stephen J., Rocap, Gabrielle, Moore, Lisa R., Biller, Steven, Thompson, Jessica Weidemier, Chisholm, Sallie (Penny), Roggensack, Sara
Published 2014

Machine-learning aided in situ drug sensitivity screening predicts treatment outcomes in ovarian PDX tumors

by Cotler, Max J, Ramadi, Khalil B, Hou, Xiaonan, Christodoulopoulos, Elena, Ahn, Sebastian, Bashyam, Ashvin, Ding, Huiming, Larson, Melissa, Oberg, Ann L, Whittaker, Charles, Jonas, Oliver, Kaufmann, Scott H, Weroha, S John, Cima, Michael J
Published 2022

Single-Cell Genomics Reveals Hundreds of Coexisting Subpopulations in Wild Prochlorococcus

by Kashtan, Nadav, Roggen, Sara E., Rodrigue, Sebastien, Thompson, Jessica Weidemier, Biller, Steven, Coe, Allison, Ding, Huiming, Marttinen, Pekka, Malmstrom, Rex R., Stocker, Roman, Stepanauskas, Ramunas, Chisholm, Sallie (Penny), Follows, Michael J, Roggensack, Sara
Published 2015

Dynamic and Coordinated Epigenetic Regulation of Developmental Transitions in the Cardiac Lineage

by Wamstad, Joseph A, Alexander, Jeffrey M, Truty, Rebecca M, Shrikumar, Avanti, Li, Fugen, Eilertson, Kirsten E, Ding, Huiming, Wylie, John N, Pico, Alexander R, Capra, John A, Erwin, Genevieve, Kattman, Steven J, Keller, Gordon M, Srivastava, Deepak, Levine, Stuart S., Pollard, Katherine S, Holloway, Alisha K, Boyer, Laurie, Bruneau, Benoit G.
Published 2014

Braveheart, a Long Noncoding RNA Required for Cardiovascular Lineage Commitment

by Klattenhoff, Carla A, Scheuermann, Johanna C, Surface, Lauren E, Bradley, Robert K, Fields, Paul A, Steinhauser, Matthew L, Ding, Huiming, Torrey, Lillian, Haas, Simon, Abo, Ryan, Tabebordbar, Mohammadsharif, Lee, Richard T, Burge, Christopher B, Klattenhoff, Carla A., Scheuermann, Johanna C., Bradley, Robert K., Fields, Paul A., Butty, Vincent L G, Boyer, Laurie Ann, Surface, Lauren Elizabeth, Burge, Christopher B
Published 2016

Scalable whole-exome sequencing of cell-free DNA reveals high concordance with metastatic tumors

by Ha, Gavin, Freeman, Samuel S., Choudhury, Atish D., Stover, Daniel G., Parsons, Heather A., Gydush, Gregory, Reed, Sarah C., Rotem, Denisse, Rhoades, Justin, Livitz, Dimitri, Rosebrock, Daniel, Leshchiner, Ignaty, Kim, Jaegil, Stewart, Chip, Rosenberg, Mara, Francis, Joshua M., Zhang, Cheng-Zhong, Cohen, Ofir, Oh, Coyin, Polak, Paz, Lloyd, Max, Mahmud, Sairah, Helvie, Karla, Merrill, Margaret S., Santiago, Rebecca A., O'Connor, Edward P., Jeong, Seong H., Kramkowski, Joseph F., Zhang, Zhenwei, Polacek, Laura, Lohr, Jens G., Schleicher, Molly, Lipscomb, Emily, Saltzman, Andrea, Oliver, Nelly M., Marini, Lori, Waks, Adrienne G., Harshman, Lauren C., Tolaney, Sara M., Van Allen, Eliezer M., Winer, Eric P., Lin, Nancy U., Nakabayashi, Mari, Taplin, Mary-Ellen, Johannessen, Cory M., Garraway, Levi A., Golub, Todd R., Boehm, Jesse S., Wagle, Nikhil, Getz, Gad, Meyerson, Matthew, Adalsteinsson, Viktor A., Loginov, Denis, Ding, Huiming, Leeson, Rachel, Barry, Rachel M, Love, John C
Published 2017