VDJSeq-Solver: in silico V(D)J recombination detection tool.

by Giulia Paciello, Andrea Acquaviva, Chiara Pighi, Alberto Ferrarini, Enrico Macii, Alberto Zamo', Elisa Ficarra
Published 2015-01-01

Tomato genome-wide transcriptional responses to Fusarium wilt and Tomato Mosaic Virus.

by Giuseppe Andolfo, Francesca Ferriello, Luca Tardella, Alberto Ferrarini, Loredana Sigillo, Luigi Frusciante, Maria Raffaella Ercolano
Published 2014-01-01

Whole-Transcriptome Analysis Unveils the Synchronized Activities of Genes for Fructans in Developing Tubers of the Jerusalem Artichoke

by Marco Bizzarri, Massimo Delledonne, Alberto Ferrarini, Paola Tononi, Elisa Zago, Doriano Vittori, Francesco Damiani, Francesco Paolocci
Published 2020-02-01

Correction: The Sulfated Laminarin Triggers a Stress Transcriptome before Priming the SA- and ROS-Dependent Defenses during Grapevine's Induced Resistance against Plasmopara vitico...

by Adrien Gauthier, Sophie Trouvelot, Jani Kelloniemi, Patrick Frettinger, David Wendehenne, Xavier Daire, Jean-Marie Joubert, Alberto Ferrarini, Massimo Delledonne, Victor Flors, Benoit Poinssot
Published 2018-01-01

The sulfated laminarin triggers a stress transcriptome before priming the SA- and ROS-dependent defenses during grapevine's induced resistance against Plasmopara viticola.

by Adrien Gauthier, Sophie Trouvelot, Jani Kelloniemi, Patrick Frettinger, David Wendehenne, Xavier Daire, Jean-Marie Joubert, Alberto Ferrarini, Massimo Delledonne, Victor Flors, Benoit Poinssot
Published 2014-01-01

MYC Amplification as a Potential Mechanism of Primary Resistance to Crizotinib in ALK-Rearranged Non-Small Cell Lung Cancer: A Brief Report

by Karim Rihawi, Roberta Alfieri, Michelangelo Fiorentino, Francesca Fontana, Elisa Capizzi, Andrea Cavazzoni, Mario Terracciano, Silvia La Monica, Alberto Ferrarini, Genny Buson, Pier Giorgio Petronini, Andrea Ardizzoni
Published 2019-01-01

The Use of Non-Variant Sites to Improve the Clinical Assessment of Whole-Genome Sequence Data.

by Alberto Ferrarini, Luciano Xumerle, Francesca Griggio, Marianna Garonzi, Chiara Cantaloni, Cesare Centomo, Sergio Marin Vargas, Patrick Descombes, Julien Marquis, Sebastiano Collino, Claudio Franceschi, Paolo Garagnani, Benjamin A Salisbury, John Max Harvey, Massimo Delledonne
Published 2015-01-01

Bifidobacterium asteroides PRL2011 genome analysis reveals clues for colonization of the insect gut.

by Francesca Bottacini, Christian Milani, Francesca Turroni, Borja Sánchez, Elena Foroni, Sabrina Duranti, Fausta Serafini, Alice Viappiani, Francesco Strati, Alberto Ferrarini, Massimo Delledonne, Bernard Henrissat, Pedro Coutinho, Gerald F Fitzgerald, Abelardo Margolles, Douwe van Sinderen, Marco Ventura
Published 2012-01-01

A streamlined workflow for single-cells genome-wide copy-number profiling by low-pass sequencing of LM-PCR whole-genome amplification products.

by Alberto Ferrarini, Claudio Forcato, Genny Buson, Paola Tononi, Valentina Del Monaco, Mario Terracciano, Chiara Bolognesi, Francesca Fontana, Gianni Medoro, Rui Neves, Birte Möhlendick, Karim Rihawi, Andrea Ardizzoni, Semini Sumanasuriya, Penny Flohr, Maryou Lambros, Johann de Bono, Nikolas H Stoecklein, Nicolò Manaresi
Published 2018-01-01

The Bifidobacterium dentium Bd1 genome sequence reflects its genetic adaptation to the human oral cavity.

by Marco Ventura, Francesca Turroni, Aldert Zomer, Elena Foroni, Vanessa Giubellini, Francesca Bottacini, Carlos Canchaya, Marcus J Claesson, Fei He, Maria Mantzourani, Laura Mulas, Alberto Ferrarini, Beile Gao, Massimo Delledonne, Bernard Henrissat, Pedro Coutinho, Marco Oggioni, Radhey S Gupta, Ziding Zhang, David Beighton, Gerald F Fitzgerald, Paul W O'Toole, Douwe van Sinderen
Published 2009-12-01

A chromosome-anchored eggplant genome sequence reveals key events in Solanaceae evolution

by Lorenzo Barchi, Marco Pietrella, Luca Venturini, Andrea Minio, Laura Toppino, Alberto Acquadro, Giuseppe Andolfo, Giuseppe Aprea, Carla Avanzato, Laura Bassolino, Cinzia Comino, Alessandra Dal Molin, Alberto Ferrarini, Louise Chappell Maor, Ezio Portis, Sebastian Reyes-Chin-Wo, Riccardo Rinaldi, Tea Sala, Davide Scaglione, Prashant Sonawane, Paola Tononi, Efrat Almekias-Siegl, Elisa Zago, Maria Raffaella Ercolano, Asaph Aharoni, Massimo Delledonne, Giovanni Giuliano, Sergio Lanteri, Giuseppe Leonardo Rotino
Published 2019-08-01

Genomic history of the Italian population recapitulates key evolutionary dynamics of both Continental and Southern Europeans

by Marco Sazzini, Paolo Abondio, Stefania Sarno, Guido Alberto Gnecchi-Ruscone, Matteo Ragno, Cristina Giuliani, Sara De Fanti, Claudia Ojeda-Granados, Alessio Boattini, Julien Marquis, Armand Valsesia, Jerome Carayol, Frederic Raymond, Chiara Pirazzini, Elena Marasco, Alberto Ferrarini, Luciano Xumerle, Sebastiano Collino, Daniela Mari, Beatrice Arosio, Daniela Monti, Giuseppe Passarino, Patrizia D’Aquila, Davide Pettener, Donata Luiselli, Gastone Castellani, Massimo Delledonne, Patrick Descombes, Claudio Franceschi, Paolo Garagnani
Published 2020-05-01

Whole-genome sequencing analysis of semi-supercentenarians

by Paolo Garagnani, Julien Marquis, Massimo Delledonne, Chiara Pirazzini, Elena Marasco, Katarzyna Malgorzata Kwiatkowska, Vincenzo Iannuzzi, Maria Giulia Bacalini, Armand Valsesia, Jerome Carayol, Frederic Raymond, Alberto Ferrarini, Luciano Xumerle, Sebastiano Collino, Daniela Mari, Beatrice Arosio, Martina Casati, Evelyn Ferri, Daniela Monti, Benedetta Nacmias, Sandro Sorbi, Donata Luiselli, Davide Pettener, Gastone Castellani, Claudia Sala, Giuseppe Passarino, Francesco De Rango, Patrizia D'Aquila, Luca Bertamini, Nicola Martinelli, Domenico Girelli, Oliviero Olivieri, Cristina Giuliani, Patrick Descombes, Claudio Franceschi
Published 2021-05-01