Advancement of Biomarker Discovery and Validation through the HUPO Plasma Proteome Project

by Gilbert S. Omenn
Published 2004-01-01

The HUPO Human Proteome Project (HPP), a Global Health Research Collaboration

by Gilbert S. Omenn
Published 2012-09-01

Proteomics Approaches to Identify Tumor Antigen Directed Autoantibodies as Cancer Biomarkers

by Yuji Imafuku, Gilbert S. Omenn, Samir Hanash
Published 2004-01-01

Alternative Splice Variants, a New Class of Protein Cancer Biomarker Candidates: Findings in Pancreatic Cancer and Breast Cancer with Systems Biology Implications

by Gilbert S. Omenn, Anastasia K. Yocum, Rajasree Menon
Published 2010-01-01

Identification of 13 Guanidinobenzoyl- or Aminidinobenzoyl-Containing Drugs to Potentially Inhibit TMPRSS2 for COVID-19 Treatment

by Xiaoqiang Huang, Robin Pearce, Gilbert S. Omenn, Yang Zhang
Published 2021-06-01

Systematically differentiating functions for alternatively spliced isoforms through integrating RNA-seq data.

by Ridvan Eksi, Hong-Dong Li, Rajasree Menon, Yuchen Wen, Gilbert S Omenn, Matthias Kretzler, Yuanfang Guan
Published 2013-01-01

Ontology-based combinatorial comparative analysis of adverse events associated with killed and live influenza vaccines.

by Sirarat Sarntivijai, Zuoshuang Xiang, Kerby A Shedden, Howard Markel, Gilbert S Omenn, Brian D Athey, Yongqun He
Published 2012-01-01

Cellular, transcriptomic and isoform heterogeneity of breast cancer cell line revealed by full-length single-cell RNA sequencing

by Shaocheng Wu, Hongjiu Zhang, Shamileh Fouladdel, Hongyang Li, Evan Keller, Max S. Wicha, Gilbert S. Omenn, Ebrahim Azizi, Yuanfang Guan
Published 2020-01-01

"Topological significance" analysis of gene expression and proteomic profiles from prostate cancer cells reveals key mechanisms of androgen response.

by Adaikkalam Vellaichamy, Zoltán Dezso, Lellean JeBailey, Arul M Chinnaiyan, Arun Sreekumar, Alexey I Nesvizhskii, Gilbert S Omenn, Andrej Bugrim
Published 2010-06-01

Novel bioinformatics method for identification of genome-wide non-canonical spliced regions using RNA-Seq data.

by Yongsheng Bai, Justin Hassler, Ahdad Ziyar, Philip Li, Zachary Wright, Rajasree Menon, Gilbert S Omenn, James D Cavalcoli, Randal J Kaufman, Maureen A Sartor
Published 2014-01-01

Proteomic interrogation of androgen action in prostate cancer cells reveals roles of aminoacyl tRNA synthetases.

by Adaikkalam Vellaichamy, Arun Sreekumar, John R Strahler, Theckelnaycke Rajendiran, Jindan Yu, Sooryanarayana Varambally, Yong Li, Gilbert S Omenn, Arul M Chinnaiyan, Alexey I Nesvizhskii
Published 2009-09-01

Integrated expression profiling and ChIP-seq analyses of the growth inhibition response program of the androgen receptor.

by Biaoyang Lin, Jun Wang, Xu Hong, Xiaowei Yan, Daehee Hwang, Ji-Hoon Cho, Danielle Yi, Angelita G Utleg, Xuefeng Fang, Dustin E Schones, Keji Zhao, Gilbert S Omenn, Leroy Hood
Published 2009-08-01

Mapping genetic variations to three-dimensional protein structures to enhance variant interpretation: a proposed framework

by Gustavo Glusman, Peter W. Rose, Andreas Prlić, Jennifer Dougherty, José M. Duarte, Andrew S. Hoffman, Geoffrey J. Barton, Emøke Bendixen, Timothy Bergquist, Christian Bock, Elizabeth Brunk, Marija Buljan, Stephen K. Burley, Binghuang Cai, Hannah Carter, JianJiong Gao, Adam Godzik, Michael Heuer, Michael Hicks, Thomas Hrabe, Rachel Karchin, Julia Koehler Leman, Lydie Lane, David L. Masica, Sean D. Mooney, John Moult, Gilbert S. Omenn, Frances Pearl, Vikas Pejaver, Sheila M. Reynolds, Ariel Rokem, Torsten Schwede, Sicheng Song, Hagen Tilgner, Yana Valasatava, Yang Zhang, Eric W. Deutsch
Published 2017-12-01

A high-stringency blueprint of the human proteome

by Subash Adhikari, Edouard C. Nice, Eric W. Deutsch, Lydie Lane, Gilbert S. Omenn, Stephen R. Pennington, Young-Ki Paik, Christopher M. Overall, Fernando J. Corrales, Ileana M. Cristea, Jennifer E. Van Eyk, Mathias Uhlén, Cecilia Lindskog, Daniel W. Chan, Amos Bairoch, James C. Waddington, Joshua L. Justice, Joshua LaBaer, Henry Rodriguez, Fuchu He, Markus Kostrzewa, Peipei Ping, Rebekah L. Gundry, Peter Stewart, Sanjeeva Srivastava, Sudhir Srivastava, Fabio C. S. Nogueira, Gilberto B. Domont, Yves Vandenbrouck, Maggie P. Y. Lam, Sara Wennersten, Juan Antonio Vizcaino, Marc Wilkins, Jochen M. Schwenk, Emma Lundberg, Nuno Bandeira, Gyorgy Marko-Varga, Susan T. Weintraub, Charles Pineau, Ulrike Kusebauch, Robert L. Moritz, Seong Beom Ahn, Magnus Palmblad, Michael P. Snyder, Ruedi Aebersold, Mark S. Baker
Published 2020-10-01

International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium

by Gabriel A. Brat, Griffin M. Weber, Nils Gehlenborg, Paul Avillach, Nathan P. Palmer, Luca Chiovato, James Cimino, Lemuel R. Waitman, Gilbert S. Omenn, Alberto Malovini, Jason H. Moore, Brett K. Beaulieu-Jones, Valentina Tibollo, Shawn N. Murphy, Sehi L’ Yi, Mark S. Keller, Riccardo Bellazzi, David A. Hanauer, Arnaud Serret-Larmande, Alba Gutierrez-Sacristan, John J. Holmes, Douglas S. Bell, Kenneth D. Mandl, Robert W. Follett, Jeffrey G. Klann, Douglas A. Murad, Luigia Scudeller, Mauro Bucalo, Katie Kirchoff, Jean Craig, Jihad Obeid, Vianney Jouhet, Romain Griffier, Sebastien Cossin, Bertrand Moal, Lav P. Patel, Antonio Bellasi, Hans U. Prokosch, Detlef Kraska, Piotr Sliz, Amelia L. M. Tan, Kee Yuan Ngiam, Alberto Zambelli, Danielle L. Mowery, Emily Schiver, Batsal Devkota, Robert L. Bradford, Mohamad Daniar, Christel Daniel, Vincent Benoit, Romain Bey, Nicolas Paris, Patricia Serre, Nina Orlova, Julien Dubiel, Martin Hilka, Anne Sophie Jannot, Stephane Breant, Judith Leblanc, Nicolas Griffon, Anita Burgun, Melodie Bernaux, Arnaud Sandrin, Elisa Salamanca, Sylvie Cormont, Thomas Ganslandt, Tobias Gradinger, Julien Champ, Martin Boeker, Patricia Martel, Loic Esteve, Alexandre Gramfort, Olivier Grisel, Damien Leprovost, Thomas Moreau, Gael Varoquaux, Jill-Jênn Vie, Demian Wassermann, Arthur Mensch, Charlotte Caucheteux, Christian Haverkamp, Guillaume Lemaitre, Silvano Bosari, Ian D. Krantz, Andrew South, Tianxi Cai, Isaac S. Kohane
Published 2020-08-01