Combining Evolutionary Information and an Iterative Sampling Strategy for Accurate Protein Structure Prediction.

by Tatjana Braun, Julia Koehler Leman, Oliver F Lange
Published 2015-12-01

Capturing conformational States in proteins using sparse paramagnetic NMR data.

by Kala Bharath Pilla, Julia Koehler Leman, Gottfried Otting, Thomas Huber
Published 2015-01-01

Improving Loop Modeling of the Antibody Complementarity-Determining Region 3 Using Knowledge-Based Restraints.

by Jessica A Finn, Julia Koehler Leman, Jordan R Willis, Alberto Cisneros, James E Crowe, Jens Meiler
Published 2016-01-01

A survey of conformational and energetic changes in G protein signaling

by Alyssa D. Lokits, Julia Koehler Leman, Kristina E. Kitko, Nathan S. Alexander, Heidi E. Hamm, Jens Meiler
Published 2015-11-01

An Integrated Framework Advancing Membrane Protein Modeling and Design.

by Rebecca F Alford, Julia Koehler Leman, Brian D Weitzner, Amanda M Duran, Drew C Tilley, Assaf Elazar, Jeffrey J Gray
Published 2015-09-01

Structure-based protein function prediction using graph convolutional networks

by Vladimir Gligorijević, P. Douglas Renfrew, Tomasz Kosciolek, Julia Koehler Leman, Daniel Berenberg, Tommi Vatanen, Chris Chandler, Bryn C. Taylor, Ian M. Fisk, Hera Vlamakis, Ramnik J. Xavier, Rob Knight, Kyunghyun Cho, Richard Bonneau
Published 2021-05-01

Better together: Elements of successful scientific software development in a distributed collaborative community.

by Julia Koehler Leman, Brian D Weitzner, P Douglas Renfrew, Steven M Lewis, Rocco Moretti, Andrew M Watkins, Vikram Khipple Mulligan, Sergey Lyskov, Jared Adolf-Bryfogle, Jason W Labonte, Justyna Krys, RosettaCommons Consortium, Christopher Bystroff, William Schief, Dominik Gront, Ora Schueler-Furman, David Baker, Philip Bradley, Roland Dunbrack, Tanja Kortemme, Andrew Leaver-Fay, Charlie E M Strauss, Jens Meiler, Brian Kuhlman, Jeffrey J Gray, Richard Bonneau
Published 2020-05-01

Mapping genetic variations to three-dimensional protein structures to enhance variant interpretation: a proposed framework

by Gustavo Glusman, Peter W. Rose, Andreas Prlić, Jennifer Dougherty, José M. Duarte, Andrew S. Hoffman, Geoffrey J. Barton, Emøke Bendixen, Timothy Bergquist, Christian Bock, Elizabeth Brunk, Marija Buljan, Stephen K. Burley, Binghuang Cai, Hannah Carter, JianJiong Gao, Adam Godzik, Michael Heuer, Michael Hicks, Thomas Hrabe, Rachel Karchin, Julia Koehler Leman, Lydie Lane, David L. Masica, Sean D. Mooney, John Moult, Gilbert S. Omenn, Frances Pearl, Vikas Pejaver, Sheila M. Reynolds, Ariel Rokem, Torsten Schwede, Sicheng Song, Hagen Tilgner, Yana Valasatava, Yang Zhang, Eric W. Deutsch
Published 2017-12-01