A generic program for multistate protein design.

by Andrew Leaver-Fay, Ron Jacak, P Benjamin Stranges, Brian Kuhlman
Published 2011-01-01

Incorporation of noncanonical amino acids into Rosetta and use in computational protein-peptide interface design.

by P Douglas Renfrew, Eun Jung Choi, Richard Bonneau, Brian Kuhlman
Published 2012-01-01

Data in support of UbSRD: The Ubiquitin Structural Relational Database

by Joseph S. Harrison, Tim M. Jacobs, Kevin Houlihan, Koenraad Van Doorslaer, Brian Kuhlman
Published 2015-12-01

Control of Protein Activity and Cell Fate Specification via Light-Mediated Nuclear Translocation.

by Hayretin Yumerefendi, Daniel J Dickinson, Hui Wang, Seth P Zimmerman, James E Bear, Bob Goldstein, Klaus Hahn, Brian Kuhlman
Published 2015-01-01

Alternative computational protocols for supercharging protein surfaces for reversible unfolding and retention of stability.

by Bryan S Der, Christien Kluwe, Aleksandr E Miklos, Ron Jacak, Sergey Lyskov, Jeffrey J Gray, George Georgiou, Andrew D Ellington, Brian Kuhlman
Published 2013-01-01

Mechanism of ubiquitin ligation and lysine prioritization by a HECT E3

by Hari B Kamadurai, Yu Qiu, Alan Deng, Joseph S Harrison, Chris MacDonald, Marcelo Actis, Patrick Rodrigues, Darcie J Miller, Judith Souphron, Steven M Lewis, Igor Kurinov, Naoaki Fujii, Michal Hammel, Robert Piper, Brian Kuhlman, Brenda A Schulman
Published 2013-08-01

Computational stabilization of T cell receptors allows pairing with antibodies to form bispecifics

by Karen Froning, Jack Maguire, Arlene Sereno, Flora Huang, Shawn Chang, Kenneth Weichert, Anton J. Frommelt, Jessica Dong, Xiufeng Wu, Heather Austin, Elaine M. Conner, Jonathan R. Fitchett, Aik Roy Heng, Deepa Balasubramaniam, Mark T. Hilgers, Brian Kuhlman, Stephen J. Demarest
Published 2020-05-01

Serverification of molecular modeling applications: the Rosetta Online Server that Includes Everyone (ROSIE).

by Sergey Lyskov, Fang-Chieh Chou, Shane Ó Conchúir, Bryan S Der, Kevin Drew, Daisuke Kuroda, Jianqing Xu, Brian D Weitzner, P Douglas Renfrew, Parin Sripakdeevong, Benjamin Borgo, James J Havranek, Brian Kuhlman, Tanja Kortemme, Richard Bonneau, Jeffrey J Gray, Rhiju Das
Published 2013-01-01

Adding diverse noncanonical backbones to rosetta: enabling peptidomimetic design.

by Kevin Drew, P Douglas Renfrew, Timothy W Craven, Glenn L Butterfoss, Fang-Chieh Chou, Sergey Lyskov, Brooke N Bullock, Andrew Watkins, Jason W Labonte, Michael Pacella, Krishna Praneeth Kilambi, Andrew Leaver-Fay, Brian Kuhlman, Jeffrey J Gray, Philip Bradley, Kent Kirshenbaum, Paramjit S Arora, Rhiju Das, Richard Bonneau
Published 2013-01-01

Hemi-methylated DNA regulates DNA methylation inheritance through allosteric activation of H3 ubiquitylation by UHRF1

by Joseph S Harrison, Evan M Cornett, Dennis Goldfarb, Paul A DaRosa, Zimeng M Li, Feng Yan, Bradley M Dickson, Angela H Guo, Daniel V Cantu, Lilia Kaustov, Peter J Brown, Cheryl H Arrowsmith, Dorothy A Erie, Michael B Major, Rachel E Klevit, Krzysztof Krajewski, Brian Kuhlman, Brian D Strahl, Scott B Rothbart
Published 2016-09-01

Better together: Elements of successful scientific software development in a distributed collaborative community.

by Julia Koehler Leman, Brian D Weitzner, P Douglas Renfrew, Steven M Lewis, Rocco Moretti, Andrew M Watkins, Vikram Khipple Mulligan, Sergey Lyskov, Jared Adolf-Bryfogle, Jason W Labonte, Justyna Krys, RosettaCommons Consortium, Christopher Bystroff, William Schief, Dominik Gront, Ora Schueler-Furman, David Baker, Philip Bradley, Roland Dunbrack, Tanja Kortemme, Andrew Leaver-Fay, Charlie E M Strauss, Jens Meiler, Brian Kuhlman, Jeffrey J Gray, Richard Bonneau
Published 2020-05-01