Model-based analysis of sample index hopping reveals its widespread artifacts in multiplexed single-cell RNA-sequencing

by Rick Farouni, Haig Djambazian, Lorenzo E. Ferri, Jiannis Ragoussis, Hamed S. Najafabadi
Published 2020-06-01

Haplotype-resolved de novo assembly of the Vero cell line genome

by Marie-Angélique Sène, Sascha Kiesslich, Haig Djambazian, Jiannis Ragoussis, Yu Xia, Amine A. Kamen
Published 2021-08-01

Methodologies for Transcript Profiling Using Long-Read Technologies

by Spyros Oikonomopoulos, Anthony Bayega, Somayyeh Fahiminiya, Haig Djambazian, Pierre Berube, Jiannis Ragoussis, Jiannis Ragoussis
Published 2020-07-01

Multilevel Space-Time Aggregation for Bright Field Cell Microscopy Segmentation and Tracking

by Tiffany Inglis, Hans De Sterck, Geoffrey Sanders, Haig Djambazian, Robert Sladek, Saravanan Sundararajan, Thomas J. Hudson
Published 2010-01-01

De novo assembly of the olive fruit fly (Bactrocera oleae) genome with linked-reads and long-read technologies minimizes gaps and provides exceptional Y chromosome assembly

by Anthony Bayega, Haig Djambazian, Konstantina T. Tsoumani, Maria-Eleni Gregoriou, Efthimia Sagri, Eleni Drosopoulou, Penelope Mavragani-Tsipidou, Kristina Giorda, George Tsiamis, Kostas Bourtzis, Spyridon Oikonomopoulos, Ken Dewar, Deanna M. Church, Alexie Papanicolaou, Kostas D. Mathiopoulos, Jiannis Ragoussis
Published 2020-03-01

White pupae phenotype of tephritids is caused by parallel mutations of a MFS transporter

by Christopher M. Ward, Roswitha A. Aumann, Mark A. Whitehead, Katerina Nikolouli, Gary Leveque, Georgia Gouvi, Elisabeth Fung, Sarah J. Reiling, Haig Djambazian, Margaret A. Hughes, Sam Whiteford, Carlos Caceres-Barrios, Thu N. M. Nguyen, Amanda Choo, Peter Crisp, Sheina B. Sim, Scott M. Geib, František Marec, Irina Häcker, Jiannis Ragoussis, Alistair C. Darby, Kostas Bourtzis, Simon W. Baxter, Marc F. Schetelig
Published 2021-01-01

The transcriptional landscape of Shh medulloblastoma

by Patryk Skowron, Hamza Farooq, Florence M. G. Cavalli, A. Sorana Morrissy, Michelle Ly, Liam D. Hendrikse, Evan Y. Wang, Haig Djambazian, Helen Zhu, Karen L. Mungall, Quang M. Trinh, Tina Zheng, Shizhong Dai, Ana S. Guerreiro Stucklin, Maria C. Vladoiu, Vernon Fong, Borja L. Holgado, Carolina Nor, Xiaochong Wu, Diala Abd-Rabbo, Pierre Bérubé, Yu Chang Wang, Betty Luu, Raul A. Suarez, Avesta Rastan, Aaron H. Gillmor, John J. Y. Lee, Xiao Yun Zhang, Craig Daniels, Peter Dirks, David Malkin, Eric Bouffet, Uri Tabori, James Loukides, François P. Doz, Franck Bourdeaut, Olivier O. Delattre, Julien Masliah-Planchon, Olivier Ayrault, Seung-Ki Kim, David Meyronet, Wieslawa A. Grajkowska, Carlos G. Carlotti, Carmen de Torres, Jaume Mora, Charles G. Eberhart, Erwin G. Van Meir, Toshihiro Kumabe, Pim J. French, Johan M. Kros, Nada Jabado, Boleslaw Lach, Ian F. Pollack, Ronald L. Hamilton, Amulya A. Nageswara Rao, Caterina Giannini, James M. Olson, László Bognár, Almos Klekner, Karel Zitterbart, Joanna J. Phillips, Reid C. Thompson, Michael K. Cooper, Joshua B. Rubin, Linda M. Liau, Miklós Garami, Peter Hauser, Kay Ka Wai Li, Ho-Keung Ng, Wai Sang Poon, G. Yancey Gillespie, Jennifer A. Chan, Shin Jung, Roger E. McLendon, Eric M. Thompson, David Zagzag, Rajeev Vibhakar, Young Shin Ra, Maria Luisa Garre, Ulrich Schüller, Tomoko Shofuda, Claudia C. Faria, Enrique López-Aguilar, Gelareh Zadeh, Chi-Chung Hui, Vijay Ramaswamy, Swneke D. Bailey, Steven J. Jones, Andrew J. Mungall, Richard A. Moore, John A. Calarco, Lincoln D. Stein, Gary D. Bader, Jüri Reimand, Jiannis Ragoussis, William A. Weiss, Marco A. Marra, Hiromichi Suzuki, Michael D. Taylor
Published 2021-03-01