Sequencing Strategies to Guide Decision Making in Cancer Treatment.

by James T Topham, Marco A Marra
Published 2016-12-01

Next-Generation Sequencing Approaches in Cancer: Where Have They Brought Us and Where Will They Take Us?

by Veronique G. LeBlanc, Marco A. Marra
Published 2015-09-01

Biomechanical Consequences of Tibial Insert Thickness after Total Knee Arthroplasty: A Musculoskeletal Simulation Study

by Periklis Tzanetis, Marco A. Marra, René Fluit, Bart Koopman, Nico Verdonschot
Published 2021-03-01

A seriation approach for visualization-driven discovery of co-expression patterns in Serial Analysis of Gene Expression (SAGE) data.

by Olena Morozova, Vyacheslav Morozov, Brad G Hoffman, Cheryl D Helgason, Marco A Marra
Published 2008-01-01

TRIM25 promotes Capicua degradation independently of ERK in the absence of ATXN1L

by Derek Wong, Lisa Sogerer, Samantha S. Lee, Victor Wong, Amy Lum, Adrian B. Levine, Marco A. Marra, Stephen Yip
Published 2020-10-01

Gait symmetry and hip strength in women with developmental dysplasia following hip arthroplasty compared to healthy subjects: A cross-sectional study.

by Ruud A Leijendekkers, Marco A Marra, Sjoerd Kolk, Geert van Bon, B Wim Schreurs, Vivian Weerdesteyn, Nico Verdonschot
Published 2018-01-01

Megabase-scale methylation phasing using nanopore long reads and NanoMethPhase

by Vahid Akbari, Jean-Michel Garant, Kieran O’Neill, Pawan Pandoh, Richard Moore, Marco A. Marra, Martin Hirst, Steven J. M. Jones
Published 2021-02-01

The Drosophila TIPE family member Sigmar interacts with the Ste20-like kinase Misshapen and modulates JNK signaling, cytoskeletal remodeling and autophagy

by Suganthi Chittaranjan, Jing Xu, Michael Kuzyk, Harpreet K. Dullat, James Wilton, Lindsay DeVorkin, Chandra Lebovitz, Gregg B. Morin, Marco A. Marra, Sharon M. Gorski
Published 2015-07-01

Precursor States of Brain Tumor Initiating Cell Lines Are Predictive of Survival in Xenografts and Associated with Glioblastoma Subtypes

by Carlo Cusulin, Charles Chesnelong, Pinaki Bose, Misha Bilenky, Karen Kopciuk, Jennifer A. Chan, J. Gregory Cairncross, Steven J. Jones, Marco A. Marra, H. Artee Luchman, Samuel Weiss
Published 2015-07-01

Twist1 transcriptional targets in the developing atrio-ventricular canal of the mouse.

by Pavle Vrljicak, Rebecca Cullum, Eric Xu, Alex C Y Chang, Elizabeth D Wederell, Mikhail Bilenky, Steven J M Jones, Marco A Marra, Aly Karsan, Pamela A Hoodless
Published 2012-01-01

Matching methods in precision oncology: An introduction and illustrative example

by Deirdre Weymann, Janessa Laskin, Steven J.M. Jones, Howard Lim, Daniel J. Renouf, Robyn Roscoe, Kasmintan A. Schrader, Sophie Sun, Stephen Yip, Marco A. Marra, Dean A. Regier
Published 2021-01-01

Characterization of the contradictory chromatin signatures at the 3' exons of zinc finger genes.

by Kimberly R Blahnik, Lei Dou, Lorigail Echipare, Sushma Iyengar, Henriette O'Geen, Erica Sanchez, Yongjun Zhao, Marco A Marra, Martin Hirst, Joseph F Costello, Ian Korf, Peggy J Farnham
Published 2011-02-01

Tumour-suppressor microRNAs regulate ovarian cancer cell physical properties and invasive behaviour

by Clara K. Chan, Yinghong Pan, Kendra Nyberg, Marco A. Marra, Emilia L. Lim, Steven J. M. Jones, Dianna Maar, Ewan A. Gibb, Preethi H. Gunaratne, A. Gordon Robertson, Amy C. Rowat
Published 2016-01-01

A Scalable Strand-Specific Protocol Enabling Full-Length Total RNA Sequencing From Single Cells

by Simon Haile, Richard D. Corbett, Veronique G. LeBlanc, Lisa Wei, Stephen Pleasance, Steve Bilobram, Ka Ming Nip, Kirstin Brown, Eva Trinh, Jillian Smith, Diane L. Trinh, Miruna Bala, Eric Chuah, Robin J. N. Coope, Richard A. Moore, Andrew J. Mungall, Karen L. Mungall, Yongjun Zhao, Martin Hirst, Samuel Aparicio, Inanc Birol, Inanc Birol, Steven J. M. Jones, Steven J. M. Jones, Marco A. Marra, Marco A. Marra
Published 2021-06-01

Mutation discovery in regions of segmental cancer genome amplifications with CoNAn-SNV: a mixture model for next generation sequencing of tumors.

by Anamaria Crisan, Rodrigo Goya, Gavin Ha, Jiarui Ding, Leah M Prentice, Arusha Oloumi, Janine Senz, Thomas Zeng, Kane Tse, Allen Delaney, Marco A Marra, David G Huntsman, Martin Hirst, Sam Aparicio, Sohrab Shah
Published 2012-01-01

Cell culture and Drosophila model systems define three classes of anaplastic lymphoma kinase mutations in neuroblastoma

by Damini Chand, Yasuo Yamazaki, Kristina Ruuth, Christina Schönherr, Tommy Martinsson, Per Kogner, Edward F. Attiyeh, John Maris, Olena Morozova, Marco A. Marra, Miki Ohira, Akira Nakagawara, Per-Erik Sandström, Ruth H. Palmer, Bengt Hallberg
Published 2013-03-01

NTRK2 Fusion driven pediatric glioblastoma: Identification of oncogenic Drivers via integrative Genome and transcriptome profiling

by Heidi M. Britton, Adrian B. Levine, Yaoqing Shen, Karen Mungall, Jonathan Serrano, Matija Snuderl, Erin Pleasance, Steven J. M. Jones, Janessa Laskin, Marco A. Marra, Shahrad R. Rassekh, Rebecca Deyell, Stephen Yip, Sylvia Cheng, Chris Dunham
Published 2021-03-01

Capicua regulates neural stem cell proliferation and lineage specification through control of Ets factors

by Shiekh Tanveer Ahmad, Alexandra D. Rogers, Myra J. Chen, Rajiv Dixit, Lata Adnani, Luke S. Frankiw, Samuel O. Lawn, Michael D. Blough, Mana Alshehri, Wei Wu, Marco A. Marra, Stephen M. Robbins, J. Gregory Cairncross, Carol Schuurmans, Jennifer A. Chan
Published 2019-05-01

deFuse: an algorithm for gene fusion discovery in tumor RNA-Seq data.

by Andrew McPherson, Fereydoun Hormozdiari, Abdalnasser Zayed, Ryan Giuliany, Gavin Ha, Mark G F Sun, Malachi Griffith, Alireza Heravi Moussavi, Janine Senz, Nataliya Melnyk, Marina Pacheco, Marco A Marra, Martin Hirst, Torsten O Nielsen, S Cenk Sahinalp, David Huntsman, Sohrab P Shah
Published 2011-05-01

Tumor infiltrating neutrophils and gland formation predict overall survival and molecular subgroups in pancreatic ductal adenocarcinoma

by Julia R. Naso, James T. Topham, Joanna M. Karasinska, Michael K.C. Lee, Steve E. Kalloger, Hui‐li Wong, Jessica Nelson, Richard A. Moore, Andrew J. Mungall, Steven J.M. Jones, Janessa Laskin, Marco A. Marra, Daniel J. Renouf, David F. Schaeffer
Published 2021-02-01