Bacterial genome editing by coupling Cre-lox and CRISPR-Cas9 systems.

by Hualan Liu, David S Robinson, Zong-Yen Wu, Rita Kuo, Yasuo Yoshikuni, Ian K Blaby, Jan-Fang Cheng
Published 2020-01-01

Reversal of carbapenem-resistance in Shewanella algae by CRISPR/Cas9 genome editing

by Zong-Yen Wu, Yao-Ting Huang, Wen-Cheng Chao, Shu-Peng Ho, Jan-Fang Cheng, Po-Yu Liu
Published 2019-07-01

Decontamination of MDA reagents for single cell whole genome amplification.

by Tanja Woyke, Alexander Sczyrba, Janey Lee, Christian Rinke, Damon Tighe, Scott Clingenpeel, Rex Malmstrom, Ramunas Stepanauskas, Jan-Fang Cheng
Published 2011-01-01

Natural variation in genes potentially involved in plant architecture and adaptation in switchgrass (Panicum virgatum L.)

by Bochra A. Bahri, Guillaume Daverdin, Xiangyang Xu, Jan-Fang Cheng, Kerrie W. Barry, E. Charles Brummer, Katrien M. Devos
Published 2018-06-01

Generation of long insert pairs using a Cre-LoxP Inverse PCR approach.

by Ze Peng, Zhiying Zhao, Nandita Nath, Jeff L Froula, Alicia Clum, Tao Zhang, Jan-Fang Cheng, Alex C Copeland, Len A Pennacchio, Feng Chen
Published 2012-01-01

Genome characterization of bile-isolated Shewanella algae ACCC

by Shu-Ying Tseng, Kwong-Chung Tung, Jan-Fang Cheng, Yi-Hsuan Lee, Zong-Yen Wu, Yu-Kai Hong, Shi-Yu Chen, Yao-Ting Huang, Po-Yu Liu
Published 2018-09-01

Genome Analysis of Multidrug-Resistant Shewanella algae Isolated From Human Soft Tissue Sample

by Yao-Ting Huang, Yu-Yu Tang, Jan-Fang Cheng, Zong-Yen Wu, Yan-Chiao Mao, Yan-Chiao Mao, Po-Yu Liu, Po-Yu Liu, Po-Yu Liu
Published 2018-04-01

One bacterial cell, one complete genome.

by Tanja Woyke, Damon Tighe, Konstantinos Mavromatis, Alicia Clum, Alex Copeland, Wendy Schackwitz, Alla Lapidus, Dongying Wu, John P McCutcheon, Bradon R McDonald, Nancy A Moran, James Bristow, Jan-Fang Cheng
Published 2010-04-01

Assembling the marine metagenome, one cell at a time.

by Tanja Woyke, Gary Xie, Alex Copeland, José M González, Cliff Han, Hajnalka Kiss, Jimmy H Saw, Pavel Senin, Chi Yang, Sourav Chatterji, Jan-Fang Cheng, Jonathan A Eisen, Michael E Sieracki, Ramunas Stepanauskas
Published 2009-01-01

A toolset of constitutive promoters for metabolic engineering of Rhodosporidium toruloides

by Luísa Czamanski Nora, Maren Wehrs, Joonhoon Kim, Jan-Fang Cheng, Angela Tarver, Blake A. Simmons, Jon Magnuson, Miranda Harmon-Smith, Rafael Silva-Rocha, John M. Gladden, Aindrila Mukhopadhyay, Jeffrey M. Skerker, James Kirby
Published 2019-06-01

Detection of S83V GyrA mutation in quinolone-resistant Shewanella algae using comparative genomics

by Chien-Hao Tseng, Jan-Fang Cheng, Shi-Yu Chen, Wen-Huei Chen, Zhi-Yuan Shi, Yu-Hui Lin, Che-An Tsai, Shih-Ping Lin, Yung-Chun Chen, Yu-Chia Lin, Yao-Ting Huang, Po-Yu Liu
Published 2021-08-01

A single-cell genomics pipeline for environmental microbial eukaryotes

by Doina Ciobanu, Alicia Clum, Steven Ahrendt, William B. Andreopoulos, Asaf Salamov, Sandy Chan, C. Alisha Quandt, Brian Foster, Jan P. Meier-Kolthoff, Yung Tsu Tang, Patrick Schwientek, Gerald L. Benny, Matthew E. Smith, Diane Bauer, Shweta Deshpande, Kerrie Barry, Alex Copeland, Steven W. Singer, Tanja Woyke, Igor V. Grigoriev, Timothy Y. James, Jan-Fang Cheng
Published 2021-04-01

The Genome Sequence of Methanohalophilus mahii SLPT Reveals Differences in the Energy Metabolism among Members of the Methanosarcinaceae Inhabiting Freshwater and Saline Environmen...

by Stefan Spring, Carmen Scheuner, Alla Lapidus, Susan Lucas, Tijana Glavina Del Rio, Hope Tice, Alex Copeland, Jan-Fang Cheng, Feng Chen, Matt Nolan, Elizabeth Saunders, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova, Konstantinos Mavromatis, Athanasios Lykidis, Amrita Pati, Amy Chen, Krishna Palaniappan, Miriam Land, Loren Hauser, Yun-Juan Chang, Cynthia D. Jeffries, Lynne Goodwin, John C. Detter, Thomas Brettin, Manfred Rohde, Markus Göker, Tanja Woyke, Jim Bristow, Jonathan A. Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans-Peter Klenk
Published 2010-01-01