Comprehensive analysis of chromosomal mobile genetic elements in the gut microbiome reveals phylum-level niche-adaptive gene pools

by Jiang, Xiaofang, Hall, Andrew Brantley, Xavier, Ramnik J., Alm, Eric J.
Published 2020

Predictability and persistence of prebiotic dietary supplementation in a healthy human cohort

by Ananthakrishnan, Ashwin, Kassam, Zain, Gurry, Thomas Jerome, Gibbons, Sean Michael, Nguyen, Le Thanh Tu, Kearney, Sean M, Jiang, Xiaofang, Duvallet, Claire, Alm, Eric J
Published 2019

Invertible promoters mediate bacterial phase variation, antibiotic resistance, and host adaptation in the gut

by Jiang, Xiaofang, Hall, A. Brantley, Arthur, Timothy D., Plitchta, Damian R., Covington, Christian T., Poyet, Mathilde, Crothers, Jessica, Moses, Peter L., Tolonen, Andrew C., Vlamakis, Hera, Alm, Eric J., Xavier, Ramnik J.
Published 2020

Analysis of 1135 gut metagenomes identifies sex-specific resistome profiles

by Sinha, Trishla, Vich Vila, Arnau, Garmaeva, Sanzhima, Jankipersadsing, Soesma A., Imhann, Floris, Collij, Valerie, Bonder, Marc Jan, Jiang, Xiaofang, Gurry, Thomas Jerome, Alm, Eric J, D'Amato, Mauro, Weersma, Rinse K., Scherjon, Sicco, Wijmenga, Cisca, Fu, Jingyuan, Kurilshikov, Alexander, Zhernakova, Alexandra
Published 2020

A novel Ruminococcus gnavus clade enriched in inflammatory bowel disease patients

by Hall, Andrew Brantley, Yassour, Moran, Sauk, Jenny, Garner, Ashley, Jiang, Xiaofang, Arthur, Timothy, Vatanen, Tommi, Fornelos, Nadine, Wilson, Robin, Bertha, Madeline, Cohen, Melissa, Garber, John, Khalili, Hamed, Gevers, Dirk, Ananthakrishnan, Ashwin N., Kugathasan, Subra, Lander, Eric S., Vlamakis, Hera, Xavier, Ramnik J., Huttenhower, Curtis, Lagoudas, Georgia K, Blainey, Paul C
Published 2018

Genome sequence of the Asian Tiger mosquito, Aedes albopictus, reveals insights into its biology, genetics, and evolution

by Chen, Xiao-Guang, Jiang, Xuanting, Gu, Jinbao, Xu, Meng, Wu, Yang, Deng, Yuhua, Zhang, Chi, Bonizzoni, Mariangela, Dermauw, Wannes, Vontas, John, Armbruster, Peter, Huang, Xin, Yang, Yulan, Zhang, Hao, He, Weiming, Peng, Hongjuan, Liu, Yongfeng, Wu, Kun, Chen, Jiahua, Lirakis, Manolis, Topalis, Pantelis, Van Leeuwen, Thomas, Hall, Andrew Brantley, Jiang, Xiaofang, Thorpe, Chevon, Mueller, Rachel Lockridge, Sun, Cheng, Yan, Guiyun, Tu, Zhijian Jake, Fang, Xiaodong, James, Anthony A., Waterhouse, Robert
Published 2016

Genome analysis of a major urban malaria vector mosquito, Anopheles stephensi

by Jiang, Xiaofang, Peery, Ashley, Hall, A. B., Sharma, Atashi, Chen, Xiao-Guang, Komissarov, Aleksey, Riehle, Michelle M., Shouche, Yogesh, Sharakhova, Maria V., Lawson, Daniel, Pakpour, Nazzy, Arensburger, Peter, Davidson, Victoria L. M., Eiglmeier, Karin, Emrich, Scott J., George, Phillip, Kennedy, Ryan C., Mane, Shrinivasrao P., Maslen, Gareth, Oringanje, Chioma, Qi, Yumin, Settlage, Robert, Tojo, Marta, Tubio, Jose M. C., Unger, Maria F., Wang, Bo, Vernick, Kenneth D., Ribeiro, Jose M. C., James, Anthony A., Michel, Kristin, Riehle, Michael A., Luckhart, Shirley, Sharakhov, Igor V., Tu, Zhijian, Waterhouse, Robert
Published 2014