Restoration of wild-type motility to flagellin-knockout Escherichia coli by varying promoter, copy number and induction strength in plasmid-based expression of flagellin

by Nicholas M. Thomson, Mark J. Pallen
Published 2020-11-01

Whole-Genome Sequencing of Brachyspira hyodysenteriae Isolates From England and Wales Reveals Similarities to European Isolates and Mutations Associated With Reduced Sensitivity to...

by Emma Stubberfield, Jonathan Sheldon, Roderick M. Card, Manal AbuOun, Jon Rogers, Susanna Williamson, Gemma L. Kay, Mark J. Pallen, Mark J. Pallen, Mark J. Pallen, Muna F. Anjum, Muna F. Anjum
Published 2021-08-01

Calculating orthologs in bacteria and Archaea: a divide and conquer approach.

by Mihail R Halachev, Nicholas J Loman, Mark J Pallen
Published 2011-01-01

Creation of Golden Gate constructs for gene doctoring

by Nicholas M. Thomson, Chuanzhen Zhang, Eleftheria Trampari, Mark J. Pallen
Published 2020-10-01

Assembly of hundreds of novel bacterial genomes from the chicken caecum

by Laura Glendinning, Robert D. Stewart, Mark J. Pallen, Kellie A. Watson, Mick Watson
Published 2020-02-01

Author Correction: Assembly of hundreds of novel bacterial genomes from the chicken caecum

by Laura Glendinning, Robert D. Stewart, Mark J. Pallen, Kellie A. Watson, Mick Watson
Published 2021-02-01

High-throughput sequencing of 16S rRNA gene amplicons: effects of extraction procedure, primer length and annealing temperature.

by Martin J Sergeant, Chrystala Constantinidou, Tristan Cogan, Charles W Penn, Mark J Pallen
Published 2012-01-01

Culture-independent detection and characterisation of Mycobacterium tuberculosis and M. africanum in sputum samples using shotgun metagenomics on a benchtop sequencer

by Emma L. Doughty, Martin J. Sergeant, Ifedayo Adetifa, Martin Antonio, Mark J. Pallen
Published 2014-09-01

Giant flagellins form thick flagellar filaments in two species of marine γ-proteobacteria.

by Nicholas M Thomson, Josie L Ferreira, Teige R Matthews-Palmer, Morgan Beeby, Mark J Pallen
Published 2018-01-01

Extensive microbial and functional diversity within the chicken cecal microbiome.

by Martin J Sergeant, Chrystala Constantinidou, Tristan A Cogan, Michael R Bedford, Charles W Penn, Mark J Pallen
Published 2014-01-01

Metagenomic profiling of ticks: Identification of novel rickettsial genomes and detection of tick-borne canine parvovirus.

by Anuradha Ravi, Suheir Ereqat, Amer Al-Jawabreh, Ziad Abdeen, Omar Abu Shamma, Holly Hall, Mark J Pallen, Abedelmajeed Nasereddin
Published 2019-01-01

Genome analysis of a highly virulent serotype 1 strain of Streptococcus pneumoniae from West Africa.

by Tiffany M Williams, Nicholas J Loman, Chinelo Ebruke, Daniel M Musher, Richard A Adegbola, Mark J Pallen, George M Weinstock, Martin Antonio
Published 2012-01-01

An In Vitro Chicken Gut Model Demonstrates Transfer of a Multidrug Resistance Plasmid from Salmonella to Commensal Escherichia coli

by Roderick M. Card, Shaun A. Cawthraw, Javier Nunez-Garcia, Richard J. Ellis, Gemma Kay, Mark J. Pallen, Martin J. Woodward, Muna F. Anjum, Mark J. Bailey
Published 2017-07-01

Clonal expansion within pneumococcal serotype 6C after use of seven-valent vaccine.

by Nicholas J Loman, Rebecca A Gladstone, Chrystala Constantinidou, Anna S Tocheva, Johanna M C Jefferies, Saul N Faust, Leigh O'Connor, Jacqueline Chan, Mark J Pallen, Stuart C Clarke
Published 2013-01-01

Microarray analysis of the Ler regulon in enteropathogenic and enterohaemorrhagic Escherichia coli strains.

by Lewis E H Bingle, Chrystala Constantinidou, Robert K Shaw, Md Shahidul Islam, Mala Patel, Lori A S Snyder, David J Lee, Charles W Penn, Stephen J W Busby, Mark J Pallen
Published 2014-01-01

Identification of novel imidazo[1,2-a]pyridine inhibitors targeting M. tuberculosis QcrB.

by Katherine A Abrahams, Jonathan A G Cox, Vickey L Spivey, Nicholas J Loman, Mark J Pallen, Chrystala Constantinidou, Raquel Fernández, Carlos Alemparte, Modesto J Remuiñán, David Barros, Lluis Ballell, Gurdyal S Besra
Published 2012-01-01

Whole-genome sequencing illuminates the evolution and spread of multidrug-resistant tuberculosis in Southwest Nigeria.

by Madikay Senghore, Jacob Otu, Adam Witney, Florian Gehre, Emma L Doughty, Gemma L Kay, Phillip Butcher, Kayode Salako, Aderemi Kehinde, Nneka Onyejepu, Emmanuel Idigbe, Tumani Corrah, Bouke de Jong, Mark J Pallen, Martin Antonio
Published 2017-01-01

Genome sequencing shows that European isolates of Francisella tularensis subspecies tularensis are almost identical to US laboratory strain Schu S4.

by Roy R Chaudhuri, Chuan-Peng Ren, Leah Desmond, Gemma A Vincent, Nigel J Silman, John K Brehm, Michael J Elmore, Michael J Hudson, Mats Forsman, Karen E Isherwood, Darina Gurycová, Nigel P Minton, Richard W Titball, Mark J Pallen, Richard Vipond
Published 2007-04-01

Extensive microbial diversity within the chicken gut microbiome revealed by metagenomics and culture

by Rachel Gilroy, Anuradha Ravi, Maria Getino, Isabella Pursley, Daniel L. Horton, Nabil-Fareed Alikhan, Dave Baker, Karim Gharbi, Neil Hall, Mick Watson, Evelien M. Adriaenssens, Ebenezer Foster-Nyarko, Sheikh Jarju, Arss Secka, Martin Antonio, Aharon Oren, Roy R. Chaudhuri, Roberto La Ragione, Falk Hildebrand, Mark J. Pallen
Published 2021-04-01

The complete genome and proteome of Laribacter hongkongensis reveal potential mechanisms for adaptations to different temperatures and habitats.

by Patrick C Y Woo, Susanna K P Lau, Herman Tse, Jade L L Teng, Shirly O T Curreem, Alan K L Tsang, Rachel Y Y Fan, Gilman K M Wong, Yi Huang, Nicholas J Loman, Lori A S Snyder, James J Cai, Jian-Dong Huang, William Mak, Mark J Pallen, Si Lok, Kwok-Yung Yuen
Published 2009-03-01